Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC026271.3-201ENST00000571884 352 ntBASIC20.49■□□□□ 0.87
PDE6CP51160 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE6CP51160 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE6CP51160 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 FP475955.4-201ENST00000623131 1990 ntBASIC20.48■□□□□ 0.87
PDE6CP51160 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDE6CP51160 AC004408.2-201ENST00000623613 2777 ntBASIC20.48■□□□□ 0.87
PDE6CP51160 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDE6CP51160 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.48■□□□□ 0.87
PDE6CP51160 AL445675.2-201ENST00000620291 557 ntBASIC20.48■□□□□ 0.87
PDE6CP51160 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDE6CP51160 AL031985.4-201ENST00000642138 673 ntBASIC20.48■□□□□ 0.87
PDE6CP51160 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.48■□□□□ 0.87
PDE6CP51160 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE6CP51160 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE6CP51160 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PDE6CP51160 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDE6CP51160 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.48■□□□□ 0.87
PDE6CP51160 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PDE6CP51160 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PDE6CP51160 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 MMP23A-201ENST00000234610 1017 ntBASIC20.47■□□□□ 0.87
PDE6CP51160 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PDE6CP51160 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.47■□□□□ 0.87
PDE6CP51160 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.47■□□□□ 0.87
PDE6CP51160 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE6CP51160 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.47■□□□□ 0.87
PDE6CP51160 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE6CP51160 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.47■□□□□ 0.87
PDE6CP51160 AC133561.5-201ENST00000635547 218 ntBASIC20.47■□□□□ 0.87
PDE6CP51160 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.47■□□□□ 0.87
PDE6CP51160 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.47■□□□□ 0.87
PDE6CP51160 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.47■□□□□ 0.87
PDE6CP51160 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PDE6CP51160 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PDE6CP51160 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDE6CP51160 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
PDE6CP51160 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PDE6CP51160 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6CP51160 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 TSPY21P-201ENST00000433481 731 ntBASIC20.46■□□□□ 0.87
PDE6CP51160 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6CP51160 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.46■□□□□ 0.87
PDE6CP51160 AC116562.2-201ENST00000507042 360 ntBASIC20.46■□□□□ 0.87
PDE6CP51160 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.46■□□□□ 0.87
PDE6CP51160 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 REXO1L10P-201ENST00000615707 1290 ntBASIC20.46■□□□□ 0.87
PDE6CP51160 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE6CP51160 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.46■□□□□ 0.87
PDE6CP51160 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE6CP51160 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6CP51160 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.46■□□□□ 0.87
PDE6CP51160 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.46■□□□□ 0.87
PDE6CP51160 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDE6CP51160 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6CP51160 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6CP51160 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
PDE6CP51160 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6CP51160 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDE6CP51160 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms