Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC9A3P48764 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC9A3P48764 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC9A3P48764 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC9A3P48764 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC9A3P48764 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC9A3P48764 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC9A3P48764 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.39■□□□□ 0.37
SLC9A3P48764 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC9A3P48764 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 AC006333.2-201ENST00000607957 2099 ntBASIC17.38■□□□□ 0.37
SLC9A3P48764 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC9A3P48764 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SLC9A3P48764 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SLC9A3P48764 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC9A3P48764 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC9A3P48764 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SLC9A3P48764 PRKY-204ENST00000533551 1019 ntBASIC17.38■□□□□ 0.37
SLC9A3P48764 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 AC092666.2-201ENST00000613287 246 ntBASIC17.38■□□□□ 0.37
SLC9A3P48764 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC9A3P48764 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC9A3P48764 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC9A3P48764 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SLC9A3P48764 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SLC9A3P48764 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC9A3P48764 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC9A3P48764 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC9A3P48764 POM121L13P-201ENST00000422362 380 ntBASIC17.37■□□□□ 0.37
SLC9A3P48764 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.37■□□□□ 0.37
SLC9A3P48764 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC9A3P48764 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC9A3P48764 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SLC9A3P48764 AC104771.1-201ENST00000603335 964 ntBASIC17.37■□□□□ 0.37
SLC9A3P48764 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC9A3P48764 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC9A3P48764 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC9A3P48764 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.37■□□□□ 0.37
SLC9A3P48764 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.37■□□□□ 0.37
SLC9A3P48764 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SLC9A3P48764 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SLC9A3P48764 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.37■□□□□ 0.37
SLC9A3P48764 AC018470.1-201ENST00000624790 3129 ntBASIC17.36■□□□□ 0.37
SLC9A3P48764 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SLC9A3P48764 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SLC9A3P48764 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 IRX1P1-201ENST00000438849 1838 ntBASIC17.36■□□□□ 0.37
SLC9A3P48764 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC9A3P48764 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC9A3P48764 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SLC9A3P48764 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC9A3P48764 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SLC9A3P48764 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC9A3P48764 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC9A3P48764 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SLC9A3P48764 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC9A3P48764 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SLC9A3P48764 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC9A3P48764 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC9A3P48764 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC9A3P48764 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms