Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 AC113410.3-201ENST00000623366 203 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 AP006294.2-201ENST00000641667 209 ntBASIC16.89■□□□□ 0.29
CSNK1A1P48729 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CSNK1A1P48729 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.89■□□□□ 0.29
CSNK1A1P48729 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 KRT8P11-201ENST00000409686 1436 ntBASIC16.88■□□□□ 0.29
CSNK1A1P48729 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 Z99916.2-201ENST00000604037 246 ntBASIC16.88■□□□□ 0.29
CSNK1A1P48729 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CSNK1A1P48729 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.88■□□□□ 0.29
CSNK1A1P48729 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 AC011506.1-201ENST00000474329 610 ntBASIC16.87■□□□□ 0.29
CSNK1A1P48729 NUDT16P1-203ENST00000513809 620 ntBASIC16.87■□□□□ 0.29
CSNK1A1P48729 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
CSNK1A1P48729 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CSNK1A1P48729 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms