Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 AC091607.1-201ENST00000490318 1060 ntBASIC21.67■■□□□ 1.06
TM4SF4P48230 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.67■■□□□ 1.06
TM4SF4P48230 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.67■■□□□ 1.06
TM4SF4P48230 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.67■■□□□ 1.06
TM4SF4P48230 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TM4SF4P48230 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 MIR940-201ENST00000401276 94 ntBASIC21.66■■□□□ 1.06
TM4SF4P48230 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.66■■□□□ 1.06
TM4SF4P48230 AC139887.3-201ENST00000568585 713 ntBASIC21.66■■□□□ 1.06
TM4SF4P48230 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TM4SF4P48230 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM4SF4P48230 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.65■■□□□ 1.06
TM4SF4P48230 ZNF259P1-201ENST00000407656 1365 ntBASIC21.65■■□□□ 1.06
TM4SF4P48230 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM4SF4P48230 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.65■■□□□ 1.06
TM4SF4P48230 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM4SF4P48230 AC018712.1-201ENST00000455767 687 ntBASIC21.65■■□□□ 1.06
TM4SF4P48230 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.65■■□□□ 1.06
TM4SF4P48230 MIR5100-201ENST00000579544 119 ntBASIC21.65■■□□□ 1.06
TM4SF4P48230 AL355385.1-201ENST00000606123 409 ntBASIC21.65■■□□□ 1.06
TM4SF4P48230 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.65■■□□□ 1.06
TM4SF4P48230 AL691403.2-201ENST00000618460 490 ntBASIC21.65■■□□□ 1.06
TM4SF4P48230 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.65■■□□□ 1.06
TM4SF4P48230 AC055717.3-201ENST00000622967 595 ntBASIC21.65■■□□□ 1.06
TM4SF4P48230 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.65■■□□□ 1.06
TM4SF4P48230 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TM4SF4P48230 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.65■■□□□ 1.06
TM4SF4P48230 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TM4SF4P48230 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM4SF4P48230 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM4SF4P48230 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.64■■□□□ 1.06
TM4SF4P48230 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM4SF4P48230 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.64■■□□□ 1.06
TM4SF4P48230 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TM4SF4P48230 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.64■■□□□ 1.06
TM4SF4P48230 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.64■■□□□ 1.05
TM4SF4P48230 MINOS1P3-201ENST00000457048 203 ntBASIC21.64■■□□□ 1.05
TM4SF4P48230 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.64■■□□□ 1.05
TM4SF4P48230 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.64■■□□□ 1.05
TM4SF4P48230 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
TM4SF4P48230 AL591684.3-201ENST00000605187 298 ntBASIC21.64■■□□□ 1.05
TM4SF4P48230 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TM4SF4P48230 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TM4SF4P48230 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.64■■□□□ 1.05
TM4SF4P48230 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.64■■□□□ 1.05
TM4SF4P48230 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TM4SF4P48230 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TM4SF4P48230 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
TM4SF4P48230 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM4SF4P48230 AL109659.2-201ENST00000606809 1674 ntBASIC21.63■■□□□ 1.05
TM4SF4P48230 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM4SF4P48230 AC022898.2-201ENST00000616822 1312 ntBASIC21.63■■□□□ 1.05
TM4SF4P48230 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM4SF4P48230 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM4SF4P48230 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.63■■□□□ 1.05
TM4SF4P48230 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TM4SF4P48230 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.63■■□□□ 1.05
TM4SF4P48230 AC073648.2-201ENST00000510116 352 ntBASIC21.63■■□□□ 1.05
TM4SF4P48230 PGAM5P1-201ENST00000518923 814 ntBASIC21.63■■□□□ 1.05
TM4SF4P48230 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TM4SF4P48230 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.63■■□□□ 1.05
TM4SF4P48230 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.63■■□□□ 1.05
TM4SF4P48230 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TM4SF4P48230 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TM4SF4P48230 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.63■■□□□ 1.05
TM4SF4P48230 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.62■■□□□ 1.05
TM4SF4P48230 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.62■■□□□ 1.05
TM4SF4P48230 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TM4SF4P48230 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TM4SF4P48230 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms