Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP13P45452 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP13P45452 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MMP13P45452 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MMP13P45452 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
MMP13P45452 HLA-A-209ENST00000638375 975 ntBASIC19.72■□□□□ 0.75
MMP13P45452 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 AL031598.1-201ENST00000561511 1773 ntBASIC19.72■□□□□ 0.75
MMP13P45452 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 WIZP1-201ENST00000531444 2299 ntBASIC19.72■□□□□ 0.75
MMP13P45452 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP13P45452 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
MMP13P45452 BICD1-207ENST00000551848 1962 ntBASIC19.72■□□□□ 0.75
MMP13P45452 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP13P45452 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP13P45452 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MMP13P45452 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP13P45452 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP13P45452 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 AL353807.1-201ENST00000427475 662 ntBASIC19.71■□□□□ 0.75
MMP13P45452 AP002982.1-201ENST00000492365 877 ntBASIC19.71■□□□□ 0.75
MMP13P45452 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP13P45452 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP13P45452 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
MMP13P45452 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP13P45452 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.71■□□□□ 0.75
MMP13P45452 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP13P45452 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
MMP13P45452 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP13P45452 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP13P45452 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP13P45452 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP13P45452 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
MMP13P45452 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP13P45452 AC104417.2-201ENST00000562989 1793 ntBASIC19.7■□□□□ 0.74
MMP13P45452 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP13P45452 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
MMP13P45452 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MMP13P45452 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP13P45452 NIFKP9-201ENST00000419265 221 ntBASIC19.7■□□□□ 0.74
MMP13P45452 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP13P45452 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP13P45452 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP13P45452 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP13P45452 AL353708.3-201ENST00000610272 989 ntBASIC19.7■□□□□ 0.74
MMP13P45452 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP13P45452 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MMP13P45452 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP13P45452 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP13P45452 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP13P45452 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP13P45452 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP13P45452 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP13P45452 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP13P45452 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 AL354751.1-201ENST00000412768 1863 ntBASIC19.69■□□□□ 0.74
MMP13P45452 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.69■□□□□ 0.74
MMP13P45452 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP13P45452 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.69■□□□□ 0.74
MMP13P45452 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP13P45452 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms