Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
GDNFP39905 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.52■□□□□ 0.23
GDNFP39905 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GDNFP39905 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GDNFP39905 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GDNFP39905 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.51■□□□□ 0.23
GDNFP39905 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GDNFP39905 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GDNFP39905 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.51■□□□□ 0.23
GDNFP39905 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GDNFP39905 SLC29A4P1-201ENST00000398760 971 ntBASIC16.51■□□□□ 0.23
GDNFP39905 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.51■□□□□ 0.23
GDNFP39905 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
GDNFP39905 AL109923.1-201ENST00000618799 583 ntBASIC16.51■□□□□ 0.23
GDNFP39905 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GDNFP39905 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.51■□□□□ 0.23
GDNFP39905 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
GDNFP39905 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.51■□□□□ 0.23
GDNFP39905 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GDNFP39905 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GDNFP39905 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
GDNFP39905 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.5■□□□□ 0.23
GDNFP39905 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.5■□□□□ 0.23
GDNFP39905 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.5■□□□□ 0.23
GDNFP39905 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.5■□□□□ 0.23
GDNFP39905 HLA-G-202ENST00000376815 851 ntBASIC16.5■□□□□ 0.23
GDNFP39905 HLA-G-203ENST00000376818 1127 ntBASIC16.5■□□□□ 0.23
GDNFP39905 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.5■□□□□ 0.23
GDNFP39905 DUSP5P2-201ENST00000426873 1033 ntBASIC16.5■□□□□ 0.23
GDNFP39905 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.5■□□□□ 0.23
GDNFP39905 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.5■□□□□ 0.23
GDNFP39905 AC104771.1-201ENST00000603335 964 ntBASIC16.5■□□□□ 0.23
GDNFP39905 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.5■□□□□ 0.23
GDNFP39905 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GDNFP39905 IRX1P1-201ENST00000438849 1838 ntBASIC16.49■□□□□ 0.23
GDNFP39905 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.49■□□□□ 0.23
GDNFP39905 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.49■□□□□ 0.23
GDNFP39905 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.49■□□□□ 0.23
GDNFP39905 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.49■□□□□ 0.23
GDNFP39905 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GDNFP39905 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GDNFP39905 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.49■□□□□ 0.23
GDNFP39905 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms