Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.07■□□□□ 0.64
CCND1P24385 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.07■□□□□ 0.64
CCND1P24385 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.07■□□□□ 0.64
CCND1P24385 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.07■□□□□ 0.64
CCND1P24385 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCND1P24385 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCND1P24385 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.07■□□□□ 0.64
CCND1P24385 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.07■□□□□ 0.64
CCND1P24385 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCND1P24385 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.07■□□□□ 0.64
CCND1P24385 AC124283.5-201ENST00000624661 1809 ntBASIC19.07■□□□□ 0.64
CCND1P24385 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCND1P24385 AC012313.1-201ENST00000593393 3059 ntBASIC19.06■□□□□ 0.64
CCND1P24385 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CCND1P24385 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.06■□□□□ 0.64
CCND1P24385 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCND1P24385 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.06■□□□□ 0.64
CCND1P24385 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.06■□□□□ 0.64
CCND1P24385 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.06■□□□□ 0.64
CCND1P24385 CD99P1-205ENST00000527459 561 ntBASIC19.06■□□□□ 0.64
CCND1P24385 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 AC008403.3-201ENST00000598924 454 ntBASIC19.06■□□□□ 0.64
CCND1P24385 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CCND1P24385 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.06■□□□□ 0.64
CCND1P24385 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.06■□□□□ 0.64
CCND1P24385 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CCND1P24385 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCND1P24385 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.06■□□□□ 0.64
CCND1P24385 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCND1P24385 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.05■□□□□ 0.64
CCND1P24385 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CCND1P24385 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CCND1P24385 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.05■□□□□ 0.64
CCND1P24385 WIZP1-201ENST00000531444 2299 ntBASIC19.05■□□□□ 0.64
CCND1P24385 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.05■□□□□ 0.64
CCND1P24385 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.05■□□□□ 0.64
CCND1P24385 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.05■□□□□ 0.64
CCND1P24385 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.05■□□□□ 0.64
CCND1P24385 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.05■□□□□ 0.64
CCND1P24385 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCND1P24385 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CCND1P24385 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCND1P24385 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCND1P24385 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCND1P24385 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.04■□□□□ 0.64
CCND1P24385 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCND1P24385 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCND1P24385 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.04■□□□□ 0.64
CCND1P24385 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CCND1P24385 PRKY-204ENST00000533551 1019 ntBASIC19.04■□□□□ 0.64
CCND1P24385 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.04■□□□□ 0.64
CCND1P24385 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.04■□□□□ 0.64
CCND1P24385 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.04■□□□□ 0.64
CCND1P24385 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCND1P24385 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.04■□□□□ 0.64
CCND1P24385 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms