Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN3P20807 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN3P20807 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CAPN3P20807 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN3P20807 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN3P20807 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN3P20807 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN3P20807 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN3P20807 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CAPN3P20807 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CAPN3P20807 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN3P20807 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN3P20807 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN3P20807 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.25■□□□□ 0.51
CAPN3P20807 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN3P20807 AC083906.6-201ENST00000641366 219 ntBASIC18.25■□□□□ 0.51
CAPN3P20807 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN3P20807 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN3P20807 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN3P20807 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN3P20807 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN3P20807 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CAPN3P20807 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN3P20807 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN3P20807 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN3P20807 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 AL121906.2-201ENST00000621597 723 ntBASIC18.24■□□□□ 0.51
CAPN3P20807 AL359736.2-201ENST00000621992 437 ntBASIC18.24■□□□□ 0.51
CAPN3P20807 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.24■□□□□ 0.51
CAPN3P20807 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN3P20807 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN3P20807 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN3P20807 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPN3P20807 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CAPN3P20807 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CAPN3P20807 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CAPN3P20807 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN3P20807 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 PCDHB18P-201ENST00000524813 2368 ntBASIC18.23■□□□□ 0.51
CAPN3P20807 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CAPN3P20807 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN3P20807 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CAPN3P20807 KRT18P16-201ENST00000510337 1294 ntBASIC18.23■□□□□ 0.51
CAPN3P20807 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.23■□□□□ 0.51
CAPN3P20807 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN3P20807 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CAPN3P20807 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN3P20807 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN3P20807 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN3P20807 NOC2LP2-201ENST00000407594 1944 ntBASIC18.23■□□□□ 0.51
CAPN3P20807 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CAPN3P20807 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms