Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.9■□□□□ 0.46
CCL4P13236 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCL4P13236 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.9■□□□□ 0.46
CCL4P13236 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CCL4P13236 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.9■□□□□ 0.46
CCL4P13236 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.9■□□□□ 0.46
CCL4P13236 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.9■□□□□ 0.46
CCL4P13236 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.9■□□□□ 0.46
CCL4P13236 AL157888.1-201ENST00000631930 593 ntBASIC17.9■□□□□ 0.46
CCL4P13236 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CCL4P13236 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.9■□□□□ 0.46
CCL4P13236 Z82202.1-201ENST00000623446 1880 ntBASIC17.9■□□□□ 0.46
CCL4P13236 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 AC016734.2-201ENST00000624325 1377 ntBASIC17.9■□□□□ 0.46
CCL4P13236 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.9■□□□□ 0.46
CCL4P13236 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL4P13236 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.89■□□□□ 0.46
CCL4P13236 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CCL4P13236 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCL4P13236 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCL4P13236 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCL4P13236 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCL4P13236 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCL4P13236 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.89■□□□□ 0.45
CCL4P13236 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.89■□□□□ 0.45
CCL4P13236 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.89■□□□□ 0.45
CCL4P13236 TSSC2-201ENST00000450217 709 ntBASIC17.89■□□□□ 0.45
CCL4P13236 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.89■□□□□ 0.45
CCL4P13236 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL4P13236 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL4P13236 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL4P13236 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 AC092329.2-201ENST00000598402 547 ntBASIC17.89■□□□□ 0.45
CCL4P13236 AC112497.1-201ENST00000624824 639 ntBASIC17.89■□□□□ 0.45
CCL4P13236 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCL4P13236 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCL4P13236 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL4P13236 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL4P13236 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL4P13236 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCL4P13236 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCL4P13236 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.88■□□□□ 0.45
CCL4P13236 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL4P13236 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL4P13236 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCL4P13236 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.88■□□□□ 0.45
CCL4P13236 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCL4P13236 BX276092.5-203ENST00000456199 560 ntBASIC17.88■□□□□ 0.45
CCL4P13236 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.88■□□□□ 0.45
CCL4P13236 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.88■□□□□ 0.45
CCL4P13236 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL4P13236 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.88■□□□□ 0.45
CCL4P13236 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.88■□□□□ 0.45
CCL4P13236 AL691432.3-201ENST00000621860 400 ntBASIC17.88■□□□□ 0.45
CCL4P13236 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCL4P13236 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL4P13236 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 AIRN-201ENST00000601203 4374 ntBASIC17.88■□□□□ 0.45
CCL4P13236 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL4P13236 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL4P13236 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.87■□□□□ 0.45
CCL4P13236 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCL4P13236 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.87■□□□□ 0.45
CCL4P13236 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCL4P13236 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL4P13236 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCL4P13236 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms