Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHAP12694 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHAP12694 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BCKDHAP12694 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.13■□□□□ 0.49
BCKDHAP12694 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BCKDHAP12694 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.13■□□□□ 0.49
BCKDHAP12694 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.13■□□□□ 0.49
BCKDHAP12694 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.13■□□□□ 0.49
BCKDHAP12694 KRASP1-201ENST00000407852 552 ntBASIC18.13■□□□□ 0.49
BCKDHAP12694 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BCKDHAP12694 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.13■□□□□ 0.49
BCKDHAP12694 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BCKDHAP12694 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.13■□□□□ 0.49
BCKDHAP12694 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.13■□□□□ 0.49
BCKDHAP12694 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BCKDHAP12694 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BCKDHAP12694 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BCKDHAP12694 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.13■□□□□ 0.49
BCKDHAP12694 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
BCKDHAP12694 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.13■□□□□ 0.49
BCKDHAP12694 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BCKDHAP12694 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.13■□□□□ 0.49
BCKDHAP12694 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.13■□□□□ 0.49
BCKDHAP12694 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BCKDHAP12694 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BCKDHAP12694 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BCKDHAP12694 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.12■□□□□ 0.49
BCKDHAP12694 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
BCKDHAP12694 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.12■□□□□ 0.49
BCKDHAP12694 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.12■□□□□ 0.49
BCKDHAP12694 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 AC239809.2-201ENST00000415381 517 ntBASIC18.12■□□□□ 0.49
BCKDHAP12694 KRT16P5-201ENST00000455284 522 ntBASIC18.12■□□□□ 0.49
BCKDHAP12694 Z85996.1-201ENST00000494644 937 ntBASIC18.12■□□□□ 0.49
BCKDHAP12694 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.12■□□□□ 0.49
BCKDHAP12694 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.12■□□□□ 0.49
BCKDHAP12694 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.12■□□□□ 0.49
BCKDHAP12694 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.12■□□□□ 0.49
BCKDHAP12694 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.12■□□□□ 0.49
BCKDHAP12694 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BCKDHAP12694 AC135050.7-201ENST00000624508 2218 ntBASIC18.12■□□□□ 0.49
BCKDHAP12694 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
BCKDHAP12694 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BCKDHAP12694 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.12■□□□□ 0.49
BCKDHAP12694 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BCKDHAP12694 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
BCKDHAP12694 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.11■□□□□ 0.49
BCKDHAP12694 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.11■□□□□ 0.49
BCKDHAP12694 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
BCKDHAP12694 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.11■□□□□ 0.49
BCKDHAP12694 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
BCKDHAP12694 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.11■□□□□ 0.49
BCKDHAP12694 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.11■□□□□ 0.49
BCKDHAP12694 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
BCKDHAP12694 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BCKDHAP12694 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
BCKDHAP12694 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BCKDHAP12694 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.1■□□□□ 0.49
BCKDHAP12694 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
BCKDHAP12694 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BCKDHAP12694 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BCKDHAP12694 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BCKDHAP12694 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.1■□□□□ 0.49
BCKDHAP12694 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BCKDHAP12694 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BCKDHAP12694 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms