Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
COL6A2P12110 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
COL6A2P12110 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
COL6A2P12110 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.75■□□□□ 0.59
COL6A2P12110 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.75■□□□□ 0.59
COL6A2P12110 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.75■□□□□ 0.59
COL6A2P12110 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.75■□□□□ 0.59
COL6A2P12110 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.75■□□□□ 0.59
COL6A2P12110 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.75■□□□□ 0.59
COL6A2P12110 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.75■□□□□ 0.59
COL6A2P12110 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.75■□□□□ 0.59
COL6A2P12110 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL6A2P12110 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.75■□□□□ 0.59
COL6A2P12110 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.74■□□□□ 0.59
COL6A2P12110 KRT8P41-201ENST00000533985 1514 ntBASIC18.74■□□□□ 0.59
COL6A2P12110 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 AC073592.3-201ENST00000625118 1834 ntBASIC18.74■□□□□ 0.59
COL6A2P12110 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL6A2P12110 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COL6A2P12110 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
COL6A2P12110 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 AL354751.1-201ENST00000412768 1863 ntBASIC18.74■□□□□ 0.59
COL6A2P12110 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.74■□□□□ 0.59
COL6A2P12110 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COL6A2P12110 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.74■□□□□ 0.59
COL6A2P12110 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.74■□□□□ 0.59
COL6A2P12110 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.74■□□□□ 0.59
COL6A2P12110 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.74■□□□□ 0.59
COL6A2P12110 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.74■□□□□ 0.59
COL6A2P12110 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.74■□□□□ 0.59
COL6A2P12110 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.74■□□□□ 0.59
COL6A2P12110 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.74■□□□□ 0.59
COL6A2P12110 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL6A2P12110 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.74■□□□□ 0.59
COL6A2P12110 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL6A2P12110 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.73■□□□□ 0.59
COL6A2P12110 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.73■□□□□ 0.59
COL6A2P12110 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL6A2P12110 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.73■□□□□ 0.59
COL6A2P12110 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.73■□□□□ 0.59
COL6A2P12110 AC008403.3-201ENST00000598924 454 ntBASIC18.73■□□□□ 0.59
COL6A2P12110 AC104771.1-201ENST00000603335 964 ntBASIC18.73■□□□□ 0.59
COL6A2P12110 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.73■□□□□ 0.59
COL6A2P12110 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.73■□□□□ 0.59
COL6A2P12110 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.73■□□□□ 0.59
COL6A2P12110 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.73■□□□□ 0.59
COL6A2P12110 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL6A2P12110 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL6A2P12110 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL6A2P12110 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.72■□□□□ 0.59
COL6A2P12110 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.72■□□□□ 0.59
COL6A2P12110 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL6A2P12110 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL6A2P12110 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.72■□□□□ 0.59
COL6A2P12110 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL6A2P12110 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL6A2P12110 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL6A2P12110 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL6A2P12110 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.72■□□□□ 0.59
COL6A2P12110 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
COL6A2P12110 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.72■□□□□ 0.59
COL6A2P12110 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL6A2P12110 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL6A2P12110 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
COL6A2P12110 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.72■□□□□ 0.59
COL6A2P12110 AC005332.8-201ENST00000622750 2735 ntBASIC18.72■□□□□ 0.59
COL6A2P12110 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL6A2P12110 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.71■□□□□ 0.59
COL6A2P12110 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.71■□□□□ 0.59
COL6A2P12110 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms