Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.92■□□□□ 0.78
RARAP10276 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RARAP10276 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RARAP10276 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RARAP10276 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RARAP10276 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.91■□□□□ 0.78
RARAP10276 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.91■□□□□ 0.78
RARAP10276 AC005332.8-201ENST00000622750 2735 ntBASIC19.91■□□□□ 0.78
RARAP10276 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RARAP10276 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.91■□□□□ 0.78
RARAP10276 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.91■□□□□ 0.78
RARAP10276 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 KRT18P29-201ENST00000397031 1267 ntBASIC19.91■□□□□ 0.78
RARAP10276 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RARAP10276 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 Z85996.1-201ENST00000494644 937 ntBASIC19.91■□□□□ 0.78
RARAP10276 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.91■□□□□ 0.78
RARAP10276 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.91■□□□□ 0.78
RARAP10276 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.91■□□□□ 0.78
RARAP10276 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.91■□□□□ 0.78
RARAP10276 AL445675.2-201ENST00000620291 557 ntBASIC19.91■□□□□ 0.78
RARAP10276 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RARAP10276 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RARAP10276 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RARAP10276 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.91■□□□□ 0.78
RARAP10276 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RARAP10276 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
RARAP10276 PRORSD1P-201ENST00000295112 541 ntBASIC19.9■□□□□ 0.78
RARAP10276 NIFKP9-201ENST00000419265 221 ntBASIC19.9■□□□□ 0.78
RARAP10276 RPS2P4-201ENST00000476944 856 ntBASIC19.9■□□□□ 0.78
RARAP10276 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.9■□□□□ 0.78
RARAP10276 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.9■□□□□ 0.78
RARAP10276 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.9■□□□□ 0.78
RARAP10276 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RARAP10276 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.9■□□□□ 0.78
RARAP10276 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RARAP10276 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RARAP10276 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RARAP10276 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RARAP10276 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.9■□□□□ 0.78
RARAP10276 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RARAP10276 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RARAP10276 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RARAP10276 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RARAP10276 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RARAP10276 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RARAP10276 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RARAP10276 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
RARAP10276 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RARAP10276 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 TSPY21P-201ENST00000433481 731 ntBASIC19.89■□□□□ 0.77
RARAP10276 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 TSPY23P-201ENST00000440136 739 ntBASIC19.89■□□□□ 0.77
RARAP10276 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.89■□□□□ 0.77
RARAP10276 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RARAP10276 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 AL353708.3-201ENST00000610272 989 ntBASIC19.89■□□□□ 0.77
RARAP10276 AC090164.3-201ENST00000610780 2143 ntBASIC19.89■□□□□ 0.77
RARAP10276 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
RARAP10276 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RARAP10276 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RARAP10276 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RARAP10276 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RARAP10276 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.88■□□□□ 0.77
RARAP10276 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.88■□□□□ 0.77
RARAP10276 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RARAP10276 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.88■□□□□ 0.77
RARAP10276 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms