Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.81■■□□□ 1.24
CHGBP05060 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CHGBP05060 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHGBP05060 KRT18P22-201ENST00000402024 1347 ntBASIC22.81■■□□□ 1.24
CHGBP05060 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
CHGBP05060 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CHGBP05060 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHGBP05060 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHGBP05060 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.8■■□□□ 1.24
CHGBP05060 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.8■■□□□ 1.24
CHGBP05060 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHGBP05060 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHGBP05060 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHGBP05060 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHGBP05060 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CHGBP05060 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.79■■□□□ 1.24
CHGBP05060 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHGBP05060 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.79■■□□□ 1.24
CHGBP05060 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHGBP05060 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
CHGBP05060 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CHGBP05060 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CHGBP05060 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
CHGBP05060 AC113347.1-201ENST00000413321 391 ntBASIC22.79■■□□□ 1.24
CHGBP05060 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.79■■□□□ 1.24
CHGBP05060 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.79■■□□□ 1.24
CHGBP05060 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHGBP05060 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.79■■□□□ 1.24
CHGBP05060 AC116562.4-202ENST00000641738 218 ntBASIC22.79■■□□□ 1.24
CHGBP05060 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.79■■□□□ 1.24
CHGBP05060 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHGBP05060 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CHGBP05060 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.78■■□□□ 1.24
CHGBP05060 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 AC006333.2-201ENST00000607957 2099 ntBASIC22.78■■□□□ 1.24
CHGBP05060 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CHGBP05060 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
CHGBP05060 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.78■■□□□ 1.24
CHGBP05060 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CHGBP05060 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.78■■□□□ 1.24
CHGBP05060 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.78■■□□□ 1.24
CHGBP05060 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 CA15P1-201ENST00000481698 905 ntBASIC22.78■■□□□ 1.24
CHGBP05060 AC005363.2-201ENST00000618631 242 ntBASIC22.78■■□□□ 1.24
CHGBP05060 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.78■■□□□ 1.24
CHGBP05060 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
CHGBP05060 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.78■■□□□ 1.24
CHGBP05060 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHGBP05060 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.77■■□□□ 1.24
CHGBP05060 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 KRT8P3-201ENST00000519669 1449 ntBASIC22.77■■□□□ 1.24
CHGBP05060 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CHGBP05060 AL023284.2-201ENST00000405850 579 ntBASIC22.77■■□□□ 1.24
CHGBP05060 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.77■■□□□ 1.24
CHGBP05060 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.77■■□□□ 1.24
CHGBP05060 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.77■■□□□ 1.24
CHGBP05060 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHGBP05060 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.77■■□□□ 1.24
CHGBP05060 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.23
CHGBP05060 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
CHGBP05060 AL512353.2-201ENST00000448759 1962 ntBASIC22.76■■□□□ 1.23
CHGBP05060 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHGBP05060 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHGBP05060 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.76■■□□□ 1.23
CHGBP05060 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.76■■□□□ 1.23
CHGBP05060 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms