Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MT-ND3P03897 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND3P03897 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND3P03897 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MT-ND3P03897 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND3P03897 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND3P03897 POM121L13P-201ENST00000422362 380 ntBASIC19.32■□□□□ 0.68
MT-ND3P03897 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.32■□□□□ 0.68
MT-ND3P03897 RPPH1-201ENST00000516869 333 ntBASIC19.32■□□□□ 0.68
MT-ND3P03897 C1QBPP2-201ENST00000528754 825 ntBASIC19.32■□□□□ 0.68
MT-ND3P03897 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.32■□□□□ 0.68
MT-ND3P03897 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.32■□□□□ 0.68
MT-ND3P03897 RN7SL471P-201ENST00000580476 299 ntBASIC19.32■□□□□ 0.68
MT-ND3P03897 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
MT-ND3P03897 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND3P03897 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND3P03897 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.32■□□□□ 0.68
MT-ND3P03897 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND3P03897 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MT-ND3P03897 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MT-ND3P03897 IRX1P1-201ENST00000438849 1838 ntBASIC19.32■□□□□ 0.68
MT-ND3P03897 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND3P03897 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND3P03897 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.32■□□□□ 0.68
MT-ND3P03897 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MT-ND3P03897 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.31■□□□□ 0.68
MT-ND3P03897 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.31■□□□□ 0.68
MT-ND3P03897 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.31■□□□□ 0.68
MT-ND3P03897 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.31■□□□□ 0.68
MT-ND3P03897 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.31■□□□□ 0.68
MT-ND3P03897 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MT-ND3P03897 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MT-ND3P03897 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.31■□□□□ 0.68
MT-ND3P03897 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MT-ND3P03897 SDHAP1-207ENST00000440850 2000 ntBASIC19.3■□□□□ 0.68
MT-ND3P03897 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-ND3P03897 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.3■□□□□ 0.68
MT-ND3P03897 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-ND3P03897 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-ND3P03897 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.3■□□□□ 0.68
MT-ND3P03897 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 AL390719.1-204ENST00000412397 1219 ntBASIC19.3■□□□□ 0.68
MT-ND3P03897 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
MT-ND3P03897 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.3■□□□□ 0.68
MT-ND3P03897 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
MT-ND3P03897 AC008550.1-201ENST00000511500 884 ntBASIC19.3■□□□□ 0.68
MT-ND3P03897 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-ND3P03897 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MT-ND3P03897 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MT-ND3P03897 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-ND3P03897 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.3■□□□□ 0.68
MT-ND3P03897 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.3■□□□□ 0.68
MT-ND3P03897 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MT-ND3P03897 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 AC104417.2-201ENST00000562989 1793 ntBASIC19.29■□□□□ 0.68
MT-ND3P03897 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.29■□□□□ 0.68
MT-ND3P03897 HTR7P1-202ENST00000624664 4411 ntBASIC19.29■□□□□ 0.68
MT-ND3P03897 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.29■□□□□ 0.68
MT-ND3P03897 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.29■□□□□ 0.68
MT-ND3P03897 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.29■□□□□ 0.68
MT-ND3P03897 AC069544.1-201ENST00000609399 999 ntBASIC19.29■□□□□ 0.68
MT-ND3P03897 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.29■□□□□ 0.68
MT-ND3P03897 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MT-ND3P03897 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms