Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AL031598.1-201ENST00000561511 1773 ntBASIC18.39■□□□□ 0.53
KRT6AP02538 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRT6AP02538 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.39■□□□□ 0.53
KRT6AP02538 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KRT6AP02538 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KRT6AP02538 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT6AP02538 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.38■□□□□ 0.53
KRT6AP02538 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.38■□□□□ 0.53
KRT6AP02538 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
KRT6AP02538 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.38■□□□□ 0.53
KRT6AP02538 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KRT6AP02538 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
KRT6AP02538 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KRT6AP02538 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT6AP02538 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.38■□□□□ 0.53
KRT6AP02538 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.38■□□□□ 0.53
KRT6AP02538 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT6AP02538 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
KRT6AP02538 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KRT6AP02538 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
KRT6AP02538 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
KRT6AP02538 TSPY23P-201ENST00000440136 739 ntBASIC18.37■□□□□ 0.53
KRT6AP02538 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6AP02538 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6AP02538 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6AP02538 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT6AP02538 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.37■□□□□ 0.53
KRT6AP02538 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT6AP02538 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.37■□□□□ 0.53
KRT6AP02538 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT6AP02538 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT6AP02538 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT6AP02538 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT6AP02538 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT6AP02538 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.36■□□□□ 0.53
KRT6AP02538 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT6AP02538 AC083906.6-201ENST00000641366 219 ntBASIC18.36■□□□□ 0.53
KRT6AP02538 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT6AP02538 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT6AP02538 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT6AP02538 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT6AP02538 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KRT6AP02538 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 AC133681.1-201ENST00000465482 601 ntBASIC18.35■□□□□ 0.53
KRT6AP02538 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT6AP02538 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT6AP02538 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
KRT6AP02538 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT6AP02538 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.35■□□□□ 0.53
KRT6AP02538 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT6AP02538 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT6AP02538 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms