Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.4■□□□□ 0.22
DHFRP00374 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.4■□□□□ 0.22
DHFRP00374 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DHFRP00374 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DHFRP00374 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.39■□□□□ 0.22
DHFRP00374 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.39■□□□□ 0.21
DHFRP00374 AL162741.1-201ENST00000565563 1558 ntBASIC16.39■□□□□ 0.21
DHFRP00374 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DHFRP00374 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.39■□□□□ 0.21
DHFRP00374 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.39■□□□□ 0.21
DHFRP00374 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.39■□□□□ 0.21
DHFRP00374 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.39■□□□□ 0.21
DHFRP00374 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.39■□□□□ 0.21
DHFRP00374 TERF1P2-201ENST00000583350 1212 ntBASIC16.39■□□□□ 0.21
DHFRP00374 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DHFRP00374 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.39■□□□□ 0.21
DHFRP00374 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.39■□□□□ 0.21
DHFRP00374 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.39■□□□□ 0.21
DHFRP00374 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
DHFRP00374 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.39■□□□□ 0.21
DHFRP00374 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DHFRP00374 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DHFRP00374 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DHFRP00374 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 IRX1P1-201ENST00000438849 1838 ntBASIC16.38■□□□□ 0.21
DHFRP00374 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DHFRP00374 TNRC18P3-201ENST00000441896 2691 ntBASIC16.38■□□□□ 0.21
DHFRP00374 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DHFRP00374 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.38■□□□□ 0.21
DHFRP00374 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.38■□□□□ 0.21
DHFRP00374 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.38■□□□□ 0.21
DHFRP00374 AC126763.1-201ENST00000552015 2118 ntBASIC16.38■□□□□ 0.21
DHFRP00374 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.38■□□□□ 0.21
DHFRP00374 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DHFRP00374 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
DHFRP00374 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DHFRP00374 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DHFRP00374 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.37■□□□□ 0.21
DHFRP00374 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.37■□□□□ 0.21
DHFRP00374 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.37■□□□□ 0.21
DHFRP00374 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.37■□□□□ 0.21
DHFRP00374 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DHFRP00374 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.37■□□□□ 0.21
DHFRP00374 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
DHFRP00374 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
DHFRP00374 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DHFRP00374 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
DHFRP00374 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms