Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB2O95900 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB2O95900 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.89■□□□□ 0.77
TRUB2O95900 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB2O95900 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB2O95900 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB2O95900 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.89■□□□□ 0.77
TRUB2O95900 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRUB2O95900 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.89■□□□□ 0.77
TRUB2O95900 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB2O95900 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB2O95900 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.89■□□□□ 0.77
TRUB2O95900 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB2O95900 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.88■□□□□ 0.77
TRUB2O95900 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
TRUB2O95900 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRUB2O95900 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB2O95900 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB2O95900 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.88■□□□□ 0.77
TRUB2O95900 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.88■□□□□ 0.77
TRUB2O95900 MMP23A-201ENST00000234610 1017 ntBASIC19.88■□□□□ 0.77
TRUB2O95900 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.88■□□□□ 0.77
TRUB2O95900 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.88■□□□□ 0.77
TRUB2O95900 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.88■□□□□ 0.77
TRUB2O95900 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB2O95900 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB2O95900 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 KRT8P9-201ENST00000558927 1449 ntBASIC19.87■□□□□ 0.77
TRUB2O95900 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRUB2O95900 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB2O95900 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRUB2O95900 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB2O95900 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.87■□□□□ 0.77
TRUB2O95900 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.87■□□□□ 0.77
TRUB2O95900 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB2O95900 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB2O95900 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.87■□□□□ 0.77
TRUB2O95900 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.87■□□□□ 0.77
TRUB2O95900 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRUB2O95900 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB2O95900 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB2O95900 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.86■□□□□ 0.77
TRUB2O95900 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
TRUB2O95900 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRUB2O95900 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.86■□□□□ 0.77
TRUB2O95900 AC073912.3-201ENST00000624414 853 ntBASIC19.86■□□□□ 0.77
TRUB2O95900 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRUB2O95900 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB2O95900 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRUB2O95900 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRUB2O95900 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRUB2O95900 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB2O95900 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.85■□□□□ 0.77
TRUB2O95900 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB2O95900 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB2O95900 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.85■□□□□ 0.77
TRUB2O95900 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.85■□□□□ 0.77
TRUB2O95900 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.85■□□□□ 0.77
TRUB2O95900 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB2O95900 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TRUB2O95900 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
TRUB2O95900 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB2O95900 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TRUB2O95900 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms