Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.34■□□□□ 0.85
CSPG5O95196 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.34■□□□□ 0.85
CSPG5O95196 NPAP1P7-201ENST00000613027 823 ntBASIC20.34■□□□□ 0.85
CSPG5O95196 CR769767.2-201ENST00000622735 460 ntBASIC20.34■□□□□ 0.85
CSPG5O95196 LINC01006-201ENST00000333319 2292 ntBASIC20.34■□□□□ 0.85
CSPG5O95196 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG5O95196 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG5O95196 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.34■□□□□ 0.85
CSPG5O95196 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG5O95196 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG5O95196 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CSPG5O95196 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSPG5O95196 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CSPG5O95196 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CSPG5O95196 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CSPG5O95196 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.33■□□□□ 0.85
CSPG5O95196 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 AL512408.1-201ENST00000569378 2000 ntBASIC20.33■□□□□ 0.85
CSPG5O95196 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSPG5O95196 AC024243.1-201ENST00000609234 778 ntBASIC20.33■□□□□ 0.85
CSPG5O95196 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.33■□□□□ 0.85
CSPG5O95196 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG5O95196 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.33■□□□□ 0.84
CSPG5O95196 AP005212.1-201ENST00000581547 1997 ntBASIC20.33■□□□□ 0.84
CSPG5O95196 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG5O95196 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CSPG5O95196 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG5O95196 AC020907.5-201ENST00000624372 1936 ntBASIC20.33■□□□□ 0.84
CSPG5O95196 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG5O95196 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSPG5O95196 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CSPG5O95196 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.32■□□□□ 0.84
CSPG5O95196 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.32■□□□□ 0.84
CSPG5O95196 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.32■□□□□ 0.84
CSPG5O95196 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.32■□□□□ 0.84
CSPG5O95196 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.32■□□□□ 0.84
CSPG5O95196 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.32■□□□□ 0.84
CSPG5O95196 NEK4P2-201ENST00000580004 1012 ntBASIC20.32■□□□□ 0.84
CSPG5O95196 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.32■□□□□ 0.84
CSPG5O95196 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CSPG5O95196 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.32■□□□□ 0.84
CSPG5O95196 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSPG5O95196 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CSPG5O95196 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.31■□□□□ 0.84
CSPG5O95196 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.31■□□□□ 0.84
CSPG5O95196 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 HBZP1-201ENST00000354915 429 ntBASIC20.31■□□□□ 0.84
CSPG5O95196 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.31■□□□□ 0.84
CSPG5O95196 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.31■□□□□ 0.84
CSPG5O95196 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.31■□□□□ 0.84
CSPG5O95196 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.31■□□□□ 0.84
CSPG5O95196 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.31■□□□□ 0.84
CSPG5O95196 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSPG5O95196 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CSPG5O95196 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.3■□□□□ 0.84
CSPG5O95196 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms