Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH16O75309 RAP2CP1-201ENST00000605103 478 ntBASIC19.18■□□□□ 0.66
CDH16O75309 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH16O75309 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDH16O75309 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH16O75309 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH16O75309 AC126763.1-201ENST00000552015 2118 ntBASIC19.18■□□□□ 0.66
CDH16O75309 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH16O75309 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH16O75309 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH16O75309 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDH16O75309 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH16O75309 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH16O75309 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH16O75309 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH16O75309 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CDH16O75309 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH16O75309 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH16O75309 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CDH16O75309 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH16O75309 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CDH16O75309 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 RPS2P52-201ENST00000469610 820 ntBASIC19.16■□□□□ 0.66
CDH16O75309 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.16■□□□□ 0.66
CDH16O75309 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CDH16O75309 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.16■□□□□ 0.66
CDH16O75309 AL121906.2-201ENST00000621597 723 ntBASIC19.16■□□□□ 0.66
CDH16O75309 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDH16O75309 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.16■□□□□ 0.66
CDH16O75309 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH16O75309 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CDH16O75309 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.15■□□□□ 0.66
CDH16O75309 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH16O75309 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDH16O75309 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH16O75309 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH16O75309 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDH16O75309 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH16O75309 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH16O75309 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDH16O75309 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH16O75309 AC026185.1-201ENST00000445748 174 ntBASIC19.15■□□□□ 0.66
CDH16O75309 KRT18P16-201ENST00000510337 1294 ntBASIC19.15■□□□□ 0.66
CDH16O75309 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.15■□□□□ 0.66
CDH16O75309 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDH16O75309 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDH16O75309 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.15■□□□□ 0.66
CDH16O75309 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH16O75309 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.15■□□□□ 0.66
CDH16O75309 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDH16O75309 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDH16O75309 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms