Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXD2O60548 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXD2O60548 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXD2O60548 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
FOXD2O60548 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXD2O60548 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
FOXD2O60548 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
FOXD2O60548 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXD2O60548 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXD2O60548 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
FOXD2O60548 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXD2O60548 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXD2O60548 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXD2O60548 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXD2O60548 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 AC018553.1-201ENST00000616682 1458 ntBASIC19.06■□□□□ 0.64
FOXD2O60548 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXD2O60548 AL845331.1-201ENST00000424978 1190 ntBASIC19.06■□□□□ 0.64
FOXD2O60548 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXD2O60548 PVRIG2P-201ENST00000435460 978 ntBASIC19.06■□□□□ 0.64
FOXD2O60548 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.06■□□□□ 0.64
FOXD2O60548 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXD2O60548 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXD2O60548 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.06■□□□□ 0.64
FOXD2O60548 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
FOXD2O60548 AC004408.2-201ENST00000623613 2777 ntBASIC19.06■□□□□ 0.64
FOXD2O60548 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXD2O60548 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FOXD2O60548 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXD2O60548 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
FOXD2O60548 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 TSPY21P-201ENST00000433481 731 ntBASIC19.05■□□□□ 0.64
FOXD2O60548 TSPY23P-201ENST00000440136 739 ntBASIC19.05■□□□□ 0.64
FOXD2O60548 AP003041.3-201ENST00000527151 707 ntBASIC19.05■□□□□ 0.64
FOXD2O60548 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
FOXD2O60548 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
FOXD2O60548 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.05■□□□□ 0.64
FOXD2O60548 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXD2O60548 AC004263.2-201ENST00000617183 678 ntBASIC19.05■□□□□ 0.64
FOXD2O60548 HYMAI.1-201ENST00000620949 238 ntBASIC19.05■□□□□ 0.64
FOXD2O60548 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
FOXD2O60548 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
FOXD2O60548 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXD2O60548 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
FOXD2O60548 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
FOXD2O60548 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FOXD2O60548 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.04■□□□□ 0.64
FOXD2O60548 Z85996.1-201ENST00000494644 937 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms