Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 NEK4P2-201ENST00000580004 1012 ntBASIC18.8■□□□□ 0.6
PCDHGA12O60330 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA12O60330 AC069148.1-201ENST00000608741 768 ntBASIC18.8■□□□□ 0.6
PCDHGA12O60330 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 KRT8P45-201ENST00000414328 1447 ntBASIC18.8■□□□□ 0.6
PCDHGA12O60330 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA12O60330 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA12O60330 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA12O60330 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 AL450487.1-201ENST00000426799 995 ntBASIC18.79■□□□□ 0.6
PCDHGA12O60330 HCG4P8-203ENST00000443049 980 ntBASIC18.79■□□□□ 0.6
PCDHGA12O60330 KRT18P38-201ENST00000449496 1282 ntBASIC18.79■□□□□ 0.6
PCDHGA12O60330 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGA12O60330 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA12O60330 AC116562.4-201ENST00000641316 2276 ntBASIC18.79■□□□□ 0.6
PCDHGA12O60330 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.78■□□□□ 0.6
PCDHGA12O60330 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 VENTXP5-201ENST00000523979 775 ntBASIC18.78■□□□□ 0.6
PCDHGA12O60330 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA12O60330 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 TCF3P1-201ENST00000423021 1937 ntBASIC18.78■□□□□ 0.6
PCDHGA12O60330 AC018445.3-201ENST00000624177 1945 ntBASIC18.78■□□□□ 0.6
PCDHGA12O60330 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA12O60330 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.77■□□□□ 0.6
PCDHGA12O60330 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.77■□□□□ 0.6
PCDHGA12O60330 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA12O60330 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA12O60330 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms