Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.5■□□□□ 0.23
XRCC2O43543 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 KRT8P41-201ENST00000533985 1514 ntBASIC16.5■□□□□ 0.23
XRCC2O43543 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC2O43543 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.49■□□□□ 0.23
XRCC2O43543 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
XRCC2O43543 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC2O43543 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.49■□□□□ 0.23
XRCC2O43543 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC2O43543 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC2O43543 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 Z85996.1-201ENST00000494644 937 ntBASIC16.49■□□□□ 0.23
XRCC2O43543 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
XRCC2O43543 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.49■□□□□ 0.23
XRCC2O43543 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC2O43543 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
XRCC2O43543 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC2O43543 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC2O43543 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC2O43543 AC006333.2-201ENST00000607957 2099 ntBASIC16.49■□□□□ 0.23
XRCC2O43543 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.49■□□□□ 0.23
XRCC2O43543 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
XRCC2O43543 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.48■□□□□ 0.23
XRCC2O43543 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
XRCC2O43543 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.48■□□□□ 0.23
XRCC2O43543 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
XRCC2O43543 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.48■□□□□ 0.23
XRCC2O43543 AC004980.1-204ENST00000429707 299 ntBASIC16.48■□□□□ 0.23
XRCC2O43543 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.48■□□□□ 0.23
XRCC2O43543 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.48■□□□□ 0.23
XRCC2O43543 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
XRCC2O43543 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.48■□□□□ 0.23
XRCC2O43543 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.48■□□□□ 0.23
XRCC2O43543 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
XRCC2O43543 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.48■□□□□ 0.23
XRCC2O43543 AL359736.2-201ENST00000621992 437 ntBASIC16.48■□□□□ 0.23
XRCC2O43543 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.48■□□□□ 0.23
XRCC2O43543 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.48■□□□□ 0.23
XRCC2O43543 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
XRCC2O43543 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
XRCC2O43543 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
XRCC2O43543 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
XRCC2O43543 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.47■□□□□ 0.23
XRCC2O43543 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.47■□□□□ 0.23
XRCC2O43543 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.47■□□□□ 0.23
XRCC2O43543 KRT16P1-201ENST00000399124 1418 ntBASIC16.47■□□□□ 0.23
XRCC2O43543 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.47■□□□□ 0.23
XRCC2O43543 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
XRCC2O43543 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
XRCC2O43543 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.47■□□□□ 0.23
XRCC2O43543 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.47■□□□□ 0.23
XRCC2O43543 NEFHP1-201ENST00000412845 2629 ntBASIC16.47■□□□□ 0.23
XRCC2O43543 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.47■□□□□ 0.23
XRCC2O43543 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 TSPY20P-201ENST00000450910 630 ntBASIC16.47■□□□□ 0.23
XRCC2O43543 AC026271.3-201ENST00000571884 352 ntBASIC16.47■□□□□ 0.23
XRCC2O43543 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.47■□□□□ 0.23
XRCC2O43543 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.47■□□□□ 0.23
XRCC2O43543 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.47■□□□□ 0.23
XRCC2O43543 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms