Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 AL031133.1-201ENST00000406807 723 ntBASIC19.62■□□□□ 0.73
COCHO43405 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.62■□□□□ 0.73
COCHO43405 MCCD1P1-208ENST00000445732 328 ntBASIC19.62■□□□□ 0.73
COCHO43405 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.62■□□□□ 0.73
COCHO43405 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.62■□□□□ 0.73
COCHO43405 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COCHO43405 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.62■□□□□ 0.73
COCHO43405 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
COCHO43405 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.62■□□□□ 0.73
COCHO43405 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COCHO43405 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
COCHO43405 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COCHO43405 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.62■□□□□ 0.73
COCHO43405 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.62■□□□□ 0.73
COCHO43405 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COCHO43405 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
COCHO43405 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.62■□□□□ 0.73
COCHO43405 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COCHO43405 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.62■□□□□ 0.73
COCHO43405 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.62■□□□□ 0.73
COCHO43405 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COCHO43405 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.62■□□□□ 0.73
COCHO43405 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.61■□□□□ 0.73
COCHO43405 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.61■□□□□ 0.73
COCHO43405 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COCHO43405 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.61■□□□□ 0.73
COCHO43405 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
COCHO43405 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
COCHO43405 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.61■□□□□ 0.73
COCHO43405 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 KRT18P38-201ENST00000449496 1282 ntBASIC19.61■□□□□ 0.73
COCHO43405 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.61■□□□□ 0.73
COCHO43405 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COCHO43405 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
COCHO43405 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.61■□□□□ 0.73
COCHO43405 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.61■□□□□ 0.73
COCHO43405 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COCHO43405 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COCHO43405 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COCHO43405 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COCHO43405 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COCHO43405 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.6■□□□□ 0.73
COCHO43405 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.6■□□□□ 0.73
COCHO43405 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.6■□□□□ 0.73
COCHO43405 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.6■□□□□ 0.73
COCHO43405 MIR3180-5-201ENST00000583743 153 ntBASIC19.6■□□□□ 0.73
COCHO43405 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.6■□□□□ 0.73
COCHO43405 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COCHO43405 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COCHO43405 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COCHO43405 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COCHO43405 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.6■□□□□ 0.73
COCHO43405 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 AL512353.2-201ENST00000448759 1962 ntBASIC19.59■□□□□ 0.73
COCHO43405 FP475955.4-201ENST00000623131 1990 ntBASIC19.59■□□□□ 0.73
COCHO43405 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.59■□□□□ 0.73
COCHO43405 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
COCHO43405 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COCHO43405 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.59■□□□□ 0.73
COCHO43405 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.59■□□□□ 0.73
COCHO43405 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.59■□□□□ 0.73
COCHO43405 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.59■□□□□ 0.73
COCHO43405 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms