Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.28■□□□□ 0.68
RIPK2O43353 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.28■□□□□ 0.68
RIPK2O43353 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
RIPK2O43353 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.28■□□□□ 0.68
RIPK2O43353 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.28■□□□□ 0.68
RIPK2O43353 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RIPK2O43353 BX276092.2-201ENST00000417668 665 ntBASIC19.28■□□□□ 0.68
RIPK2O43353 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.28■□□□□ 0.68
RIPK2O43353 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
RIPK2O43353 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RIPK2O43353 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.28■□□□□ 0.68
RIPK2O43353 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.28■□□□□ 0.68
RIPK2O43353 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIPK2O43353 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.28■□□□□ 0.68
RIPK2O43353 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RIPK2O43353 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.27■□□□□ 0.68
RIPK2O43353 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.27■□□□□ 0.68
RIPK2O43353 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.27■□□□□ 0.68
RIPK2O43353 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.27■□□□□ 0.68
RIPK2O43353 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.27■□□□□ 0.68
RIPK2O43353 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.27■□□□□ 0.68
RIPK2O43353 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIPK2O43353 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
RIPK2O43353 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIPK2O43353 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RIPK2O43353 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RIPK2O43353 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 TUBB8P6-201ENST00000436895 1288 ntBASIC19.26■□□□□ 0.67
RIPK2O43353 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.26■□□□□ 0.67
RIPK2O43353 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.26■□□□□ 0.67
RIPK2O43353 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RIPK2O43353 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.26■□□□□ 0.67
RIPK2O43353 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
RIPK2O43353 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIPK2O43353 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
RIPK2O43353 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK2O43353 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK2O43353 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RIPK2O43353 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RIPK2O43353 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RIPK2O43353 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RIPK2O43353 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.25■□□□□ 0.67
RIPK2O43353 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.25■□□□□ 0.67
RIPK2O43353 TSPY21P-201ENST00000433481 731 ntBASIC19.25■□□□□ 0.67
RIPK2O43353 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.25■□□□□ 0.67
RIPK2O43353 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIPK2O43353 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RIPK2O43353 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIPK2O43353 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms