Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.67■□□□□ 0.9
TNRC18O15417 AJ011932.1-201ENST00000621707 465 ntBASIC20.67■□□□□ 0.9
TNRC18O15417 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.67■□□□□ 0.9
TNRC18O15417 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TNRC18O15417 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.67■□□□□ 0.9
TNRC18O15417 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
TNRC18O15417 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 UNC93B6-202ENST00000528242 690 ntBASIC20.67■□□□□ 0.9
TNRC18O15417 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.67■□□□□ 0.9
TNRC18O15417 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 AL162377.1-201ENST00000618844 1793 ntBASIC20.67■□□□□ 0.9
TNRC18O15417 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNRC18O15417 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.67■□□□□ 0.9
TNRC18O15417 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.67■□□□□ 0.9
TNRC18O15417 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 AC087641.1-201ENST00000557561 1021 ntBASIC20.67■□□□□ 0.9
TNRC18O15417 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.67■□□□□ 0.9
TNRC18O15417 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.67■□□□□ 0.9
TNRC18O15417 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNRC18O15417 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 HLA-J-201ENST00000462773 1622 ntBASIC20.66■□□□□ 0.9
TNRC18O15417 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
TNRC18O15417 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.66■□□□□ 0.9
TNRC18O15417 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.66■□□□□ 0.9
TNRC18O15417 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
TNRC18O15417 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TNRC18O15417 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.66■□□□□ 0.9
TNRC18O15417 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.66■□□□□ 0.9
TNRC18O15417 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.66■□□□□ 0.9
TNRC18O15417 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.66■□□□□ 0.9
TNRC18O15417 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TNRC18O15417 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.65■□□□□ 0.9
TNRC18O15417 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.65■□□□□ 0.9
TNRC18O15417 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TNRC18O15417 RBM17P3-201ENST00000417687 1192 ntBASIC20.65■□□□□ 0.9
TNRC18O15417 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.65■□□□□ 0.9
TNRC18O15417 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TNRC18O15417 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.65■□□□□ 0.9
TNRC18O15417 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.65■□□□□ 0.9
TNRC18O15417 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNRC18O15417 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
TNRC18O15417 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.64■□□□□ 0.9
TNRC18O15417 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNRC18O15417 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.64■□□□□ 0.9
TNRC18O15417 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.64■□□□□ 0.9
TNRC18O15417 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNRC18O15417 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNRC18O15417 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.64■□□□□ 0.89
TNRC18O15417 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNRC18O15417 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.64■□□□□ 0.89
TNRC18O15417 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TNRC18O15417 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNRC18O15417 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.64■□□□□ 0.89
TNRC18O15417 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.64■□□□□ 0.89
TNRC18O15417 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.64■□□□□ 0.89
TNRC18O15417 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.64■□□□□ 0.89
TNRC18O15417 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNRC18O15417 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TNRC18O15417 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.64■□□□□ 0.89
TNRC18O15417 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.64■□□□□ 0.89
TNRC18O15417 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.64■□□□□ 0.89
TNRC18O15417 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.64■□□□□ 0.89
TNRC18O15417 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.64■□□□□ 0.89
TNRC18O15417 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 OR8S1-201ENST00000310194 1080 ntBASIC20.63■□□□□ 0.89
TNRC18O15417 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 AC021087.4-201ENST00000563761 564 ntBASIC20.63■□□□□ 0.89
TNRC18O15417 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.63■□□□□ 0.89
TNRC18O15417 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.63■□□□□ 0.89
TNRC18O15417 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.63■□□□□ 0.89
TNRC18O15417 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNRC18O15417 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms