Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SMAD9O15198 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.22■□□□□ 0.35
SMAD9O15198 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
SMAD9O15198 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMAD9O15198 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.22■□□□□ 0.35
SMAD9O15198 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.22■□□□□ 0.35
SMAD9O15198 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.22■□□□□ 0.35
SMAD9O15198 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMAD9O15198 AP003071.4-201ENST00000562276 1284 ntBASIC17.22■□□□□ 0.35
SMAD9O15198 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD9O15198 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD9O15198 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD9O15198 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 RCC2P6-201ENST00000526625 1557 ntBASIC17.22■□□□□ 0.35
SMAD9O15198 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.22■□□□□ 0.35
SMAD9O15198 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD9O15198 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SMAD9O15198 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.21■□□□□ 0.35
SMAD9O15198 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMAD9O15198 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SMAD9O15198 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMAD9O15198 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 MESTP1-201ENST00000404287 994 ntBASIC17.21■□□□□ 0.35
SMAD9O15198 B3GAT3P1-201ENST00000471720 806 ntBASIC17.21■□□□□ 0.35
SMAD9O15198 AC116562.2-201ENST00000507042 360 ntBASIC17.21■□□□□ 0.35
SMAD9O15198 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.21■□□□□ 0.35
SMAD9O15198 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.21■□□□□ 0.35
SMAD9O15198 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 REXO1L10P-201ENST00000615707 1290 ntBASIC17.21■□□□□ 0.35
SMAD9O15198 MIR6786-201ENST00000616843 113 ntBASIC17.21■□□□□ 0.35
SMAD9O15198 REXO1L12P-201ENST00000622156 912 ntBASIC17.21■□□□□ 0.35
SMAD9O15198 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.21■□□□□ 0.35
SMAD9O15198 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.21■□□□□ 0.35
SMAD9O15198 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD9O15198 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD9O15198 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMAD9O15198 KRT8P41-201ENST00000533985 1514 ntBASIC17.21■□□□□ 0.34
SMAD9O15198 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SMAD9O15198 AC093484.2-201ENST00000580996 2166 ntBASIC17.21■□□□□ 0.34
SMAD9O15198 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SMAD9O15198 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.2■□□□□ 0.34
SMAD9O15198 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.2■□□□□ 0.34
SMAD9O15198 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SMAD9O15198 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SMAD9O15198 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.2■□□□□ 0.34
SMAD9O15198 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.2■□□□□ 0.34
SMAD9O15198 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.2■□□□□ 0.34
SMAD9O15198 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.2■□□□□ 0.34
SMAD9O15198 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.2■□□□□ 0.34
SMAD9O15198 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SMAD9O15198 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.2■□□□□ 0.34
SMAD9O15198 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 AC011506.1-201ENST00000474329 610 ntBASIC17.2■□□□□ 0.34
SMAD9O15198 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.2■□□□□ 0.34
SMAD9O15198 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.2■□□□□ 0.34
SMAD9O15198 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.2■□□□□ 0.34
SMAD9O15198 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SMAD9O15198 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SMAD9O15198 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms