Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
AP3D1O14617 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
AP3D1O14617 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 TUBB8P6-201ENST00000436895 1288 ntBASIC17.74■□□□□ 0.43
AP3D1O14617 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.74■□□□□ 0.43
AP3D1O14617 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
AP3D1O14617 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.74■□□□□ 0.43
AP3D1O14617 PRKY-204ENST00000533551 1019 ntBASIC17.74■□□□□ 0.43
AP3D1O14617 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.74■□□□□ 0.43
AP3D1O14617 MIR4651-201ENST00000582622 73 ntBASIC17.74■□□□□ 0.43
AP3D1O14617 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
AP3D1O14617 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
AP3D1O14617 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
AP3D1O14617 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
AP3D1O14617 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
AP3D1O14617 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
AP3D1O14617 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
AP3D1O14617 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
AP3D1O14617 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3D1O14617 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.73■□□□□ 0.43
AP3D1O14617 MTDHP1-201ENST00000605323 784 ntBASIC17.73■□□□□ 0.43
AP3D1O14617 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3D1O14617 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
AP3D1O14617 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
AP3D1O14617 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.73■□□□□ 0.43
AP3D1O14617 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3D1O14617 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
AP3D1O14617 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 SDHAP1-207ENST00000440850 2000 ntBASIC17.72■□□□□ 0.43
AP3D1O14617 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
AP3D1O14617 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.72■□□□□ 0.43
AP3D1O14617 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.72■□□□□ 0.43
AP3D1O14617 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 NBPF21P-201ENST00000425093 1451 ntBASIC17.72■□□□□ 0.43
AP3D1O14617 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.72■□□□□ 0.43
AP3D1O14617 CD99P1-205ENST00000527459 561 ntBASIC17.72■□□□□ 0.43
AP3D1O14617 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
AP3D1O14617 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
AP3D1O14617 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.72■□□□□ 0.43
AP3D1O14617 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.72■□□□□ 0.43
AP3D1O14617 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3D1O14617 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.72■□□□□ 0.43
AP3D1O14617 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
AP3D1O14617 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP3D1O14617 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.71■□□□□ 0.43
AP3D1O14617 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3D1O14617 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
AP3D1O14617 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
AP3D1O14617 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3D1O14617 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.71■□□□□ 0.43
AP3D1O14617 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3D1O14617 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 AL023875.1-201ENST00000640777 796 ntBASIC17.71■□□□□ 0.43
AP3D1O14617 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3D1O14617 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
AP3D1O14617 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3D1O14617 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.71■□□□□ 0.43
AP3D1O14617 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
AP3D1O14617 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.71■□□□□ 0.43
AP3D1O14617 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms