Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
UPK2O00526 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK2O00526 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.23■□□□□ 0.03
UPK2O00526 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK2O00526 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK2O00526 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.23■□□□□ 0.03
UPK2O00526 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.23■□□□□ 0.03
UPK2O00526 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UPK2O00526 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UPK2O00526 BCL2-203ENST00000589955 5011 ntBASIC15.23■□□□□ 0.03
UPK2O00526 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
UPK2O00526 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.23■□□□□ 0.03
UPK2O00526 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.23■□□□□ 0.03
UPK2O00526 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 AC005082.1-201ENST00000413042 2259 ntBASIC15.22■□□□□ 0.03
UPK2O00526 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UPK2O00526 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
UPK2O00526 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.22■□□□□ 0.03
UPK2O00526 KRT8P41-201ENST00000533985 1514 ntBASIC15.22■□□□□ 0.03
UPK2O00526 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UPK2O00526 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
UPK2O00526 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UPK2O00526 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
UPK2O00526 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK2O00526 AC079598.2-202ENST00000546624 1451 ntBASIC15.21■□□□□ 0.03
UPK2O00526 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
UPK2O00526 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
UPK2O00526 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.21■□□□□ 0.03
UPK2O00526 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
UPK2O00526 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.21■□□□□ 0.03
UPK2O00526 KRT16P5-201ENST00000455284 522 ntBASIC15.21■□□□□ 0.03
UPK2O00526 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UPK2O00526 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK2O00526 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
UPK2O00526 AC233263.1-201ENST00000578059 224 ntBASIC15.21■□□□□ 0.03
UPK2O00526 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.21■□□□□ 0.03
UPK2O00526 AL023875.1-201ENST00000640777 796 ntBASIC15.21■□□□□ 0.03
UPK2O00526 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UPK2O00526 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK2O00526 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.21■□□□□ 0.03
UPK2O00526 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
UPK2O00526 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UPK2O00526 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK2O00526 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UPK2O00526 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms