Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TPSP2-201ENST00000561760 610 ntBASIC18.55■□□□□ 0.56
C4orf47A7E2U8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.55■□□□□ 0.56
C4orf47A7E2U8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.55■□□□□ 0.56
C4orf47A7E2U8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.55■□□□□ 0.56
C4orf47A7E2U8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.55■□□□□ 0.56
C4orf47A7E2U8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C4orf47A7E2U8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C4orf47A7E2U8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C4orf47A7E2U8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 DRAXINP1-201ENST00000437611 948 ntBASIC18.54■□□□□ 0.56
C4orf47A7E2U8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 AC120114.3-201ENST00000611923 658 ntBASIC18.54■□□□□ 0.56
C4orf47A7E2U8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 PCDHAC2-203ENST00000615316 3011 ntBASIC18.54■□□□□ 0.56
C4orf47A7E2U8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.54■□□□□ 0.56
C4orf47A7E2U8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 MRPL3P1-201ENST00000400109 1033 ntBASIC18.53■□□□□ 0.56
C4orf47A7E2U8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 AP005212.1-201ENST00000581547 1997 ntBASIC18.53■□□□□ 0.56
C4orf47A7E2U8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C4orf47A7E2U8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 TOB2P1-201ENST00000469761 992 ntBASIC18.52■□□□□ 0.56
C4orf47A7E2U8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 AC012615.1-201ENST00000565797 1299 ntBASIC18.52■□□□□ 0.56
C4orf47A7E2U8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 AL671883.3-201ENST00000603274 991 ntBASIC18.52■□□□□ 0.56
C4orf47A7E2U8 AC079602.3-201ENST00000623931 403 ntBASIC18.52■□□□□ 0.56
C4orf47A7E2U8 AC117500.6-201ENST00000624871 588 ntBASIC18.52■□□□□ 0.56
C4orf47A7E2U8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
C4orf47A7E2U8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C4orf47A7E2U8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
C4orf47A7E2U8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
C4orf47A7E2U8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C4orf47A7E2U8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms