Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL1A6NKG5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
RTL1A6NKG5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL1A6NKG5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL1A6NKG5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL1A6NKG5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL1A6NKG5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.18■■□□□ 1.62
RTL1A6NKG5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC25.18■■□□□ 1.62
RTL1A6NKG5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.18■■□□□ 1.62
RTL1A6NKG5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL1A6NKG5 AC092119.3-201ENST00000612618 583 ntBASIC25.18■■□□□ 1.62
RTL1A6NKG5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
RTL1A6NKG5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 AL162741.1-201ENST00000565563 1558 ntBASIC25.17■■□□□ 1.62
RTL1A6NKG5 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.17■■□□□ 1.62
RTL1A6NKG5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 MIR3180-1-201ENST00000580374 94 ntBASIC25.17■■□□□ 1.62
RTL1A6NKG5 MIR3180-3-201ENST00000584616 94 ntBASIC25.17■■□□□ 1.62
RTL1A6NKG5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 AC011498.5-201ENST00000592027 486 ntBASIC25.17■■□□□ 1.62
RTL1A6NKG5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 AL512353.2-201ENST00000448759 1962 ntBASIC25.17■■□□□ 1.62
RTL1A6NKG5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL1A6NKG5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.17■■□□□ 1.62
RTL1A6NKG5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL1A6NKG5 KRT8P7-201ENST00000533003 1432 ntBASIC25.16■■□□□ 1.62
RTL1A6NKG5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL1A6NKG5 PWWP2AP1-201ENST00000429776 2273 ntBASIC25.16■■□□□ 1.62
RTL1A6NKG5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTL1A6NKG5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL1A6NKG5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL1A6NKG5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 TSSC2-201ENST00000450217 709 ntBASIC25.16■■□□□ 1.62
RTL1A6NKG5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 AL121672.3-201ENST00000608644 468 ntBASIC25.16■■□□□ 1.62
RTL1A6NKG5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.16■■□□□ 1.62
RTL1A6NKG5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL1A6NKG5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL1A6NKG5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC25.15■■□□□ 1.62
RTL1A6NKG5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC25.14■■□□□ 1.62
RTL1A6NKG5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTL1A6NKG5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
RTL1A6NKG5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
RTL1A6NKG5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RTL1A6NKG5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL1A6NKG5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
RTL1A6NKG5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RTL1A6NKG5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL1A6NKG5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL1A6NKG5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RTL1A6NKG5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25.14■■□□□ 1.61
RTL1A6NKG5 AC016734.2-201ENST00000624325 1377 ntBASIC25.13■■□□□ 1.61
RTL1A6NKG5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTL1A6NKG5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTL1A6NKG5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC25.13■■□□□ 1.61
RTL1A6NKG5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms