Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 AC145285.6-201ENST00000604632 637 ntBASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 LINC01568-207ENST00000641790 1380 ntBASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
TRAV25A0A0B4J276 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 AL353719.1-201ENST00000566847 864 ntBASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 AC010947.1-201ENST00000623454 693 ntBASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 AC133561.5-201ENST00000635547 218 ntBASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 AC097493.4-201ENST00000641197 219 ntBASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAV25A0A0B4J276 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 AL023803.3-201ENST00000615559 522 ntBASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV25A0A0B4J276 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 IRX1P1-201ENST00000438849 1838 ntBASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV25A0A0B4J276 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms