Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC139713.2-201ENST00000641328 2723 ntBASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.88■□□□□ 0.13
TRBV6-7A0A0A0MS04 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-7A0A0A0MS04 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-7A0A0A0MS04 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-7A0A0A0MS04 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms