Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 Six3os1_2.1-201ENST00000616963 217 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR6721-201ENST00000617181 87 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR6134-201ENST00000617606 109 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MRPL57P3-201ENST00000619218 176 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AP005212.3-201ENST00000619964 528 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR8065-201ENST00000620577 100 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR6503-201ENST00000622884 86 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AP000550.3-201ENST00000637734 379 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 AC006504.1-201ENST00000562493 3666 ntBASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC1.25□□□□□ -2.21
KRTAP4-4Q9BYR3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 AC009948.5-201ENST00000624360 4406 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 STAG3L4-201ENST00000352103 530 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA9.1-201ENST00000362412 131 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 Y_RNA.74-201ENST00000362911 99 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP114-201ENST00000363780 113 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 SNORA25.6-201ENST00000364121 118 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RN7SKP107-201ENST00000364157 290 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 Y_RNA.282-201ENST00000364793 102 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNA5SP77-201ENST00000365394 120 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU1-57P-201ENST00000384491 166 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR521-2-201ENST00000384818 87 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 MIR125B1-201ENST00000385236 88 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-913P-201ENST00000390913 95 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-821P-201ENST00000390995 107 ntBASIC1.24□□□□□ -2.21
KRTAP4-4Q9BYR3 RNU6-1246P-201ENST00000391064 107 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms