Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU2-59P-201ENST00000410482 191 ntBASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 RNU6-141P-201ENST00000410499 105 ntBASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 RPL7AP28-201ENST00000464513 571 ntBASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 AC010547.6-201ENST00000571789 193 ntBASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 AC006130.2-201ENST00000586202 326 ntBASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 UBE3AP2-201ENST00000429033 2259 ntBASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
MS4A3Q96HJ5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 ABCC13-202ENST00000463099 3842 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 Y_RNA.247-201ENST00000364500 92 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 SNORA17A-201ENST00000391185 133 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 RPL11P3-201ENST00000395256 523 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 AL445685.2-201ENST00000422551 342 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 RNU6-341P-201ENST00000516973 96 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 IGLV3-24-201ENST00000517477 197 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 AC006272.2-201ENST00000594725 163 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 SNORA17.5-201ENST00000630429 132 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 AC008264.2-201ENST00000610193 3731 ntBASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
MS4A3Q96HJ5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 RNA5SP46-201ENST00000362370 120 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 RNA5SP326-201ENST00000363209 110 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 RN7SKP202-201ENST00000410439 330 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 RN7SKP286-201ENST00000410894 299 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 AC069257.2-201ENST00000441819 155 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 RN7SL273P-201ENST00000481561 299 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 IGKV3D-34-201ENST00000522638 302 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 RNA5SP440-201ENST00000612665 119 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 AC090517.3-201ENST00000625170 141 ntBASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.91□□□□□ -1.62
MS4A3Q96HJ5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 AL133412.1-201ENST00000380194 2992 ntBASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
MS4A3Q96HJ5 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 RNU6-1244P-201ENST00000363614 108 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 SNORD38.1-201ENST00000363863 68 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 RNA5SP131-201ENST00000365452 119 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 AC025750.2-201ENST00000442609 450 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 SCARNA3-201ENST00000517097 143 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 RNU6-1015P-201ENST00000517121 99 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 MIR4505-201ENST00000582238 73 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 PCAT14-202ENST00000627127 3935 ntBASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
MS4A3Q96HJ5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.89□□□□□ -1.63
MS4A3Q96HJ5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MS4A3Q96HJ5 RNA5SP242-201ENST00000364171 118 ntBASIC4.89□□□□□ -1.63
MS4A3Q96HJ5 RNU6-380P-201ENST00000410207 107 ntBASIC4.89□□□□□ -1.63
MS4A3Q96HJ5 RNU6-1186P-201ENST00000410429 97 ntBASIC4.89□□□□□ -1.63
MS4A3Q96HJ5 SDHDP6-201ENST00000414693 480 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms