Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 RNU5B-3P-201ENST00000516601 115 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-307P-201ENST00000516743 106 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 AC009541.1-201ENST00000438279 2662 ntBASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP3Q96JB5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 Y_RNA.138-201ENST00000363462 102 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 SET-203ENST00000372688 801 ntTSL 2 BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 RNU1-109P-201ENST00000383960 147 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-622P-201ENST00000384272 103 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 RNA5SP390-201ENST00000410191 113 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-1140P-201ENST00000410517 106 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 MIR2053-201ENST00000459295 91 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 RPL30P12-201ENST00000474666 353 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 CKS1BP7-201ENST00000522230 235 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 COX6CP5-201ENST00000527162 228 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 AC090897.2-201ENST00000581715 130 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 AC005899.2-201ENST00000584353 90 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 BNIP3P22-201ENST00000593399 556 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 AL080274.1-201ENST00000605565 220 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 HMGB1P24-202ENST00000615653 685 ntBASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDK5RAP3Q96JB5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 RNU1-35P-201ENST00000362782 153 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 MIR512-1-201ENST00000384913 84 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 AC138623.1-201ENST00000418060 216 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 AL139281.1-201ENST00000422120 335 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 AP001324.2-201ENST00000461163 319 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 CBX3P8-201ENST00000532412 525 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 CYP2C61P-201ENST00000604072 290 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 AC091953.5-201ENST00000622919 233 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 MTND5P9-201ENST00000503854 1755 ntBASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP3Q96JB5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 SNORD50.1-201ENST00000362987 71 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 SNORD42.2-201ENST00000365570 69 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-1040P-201ENST00000383974 107 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 Y_RNA.533-201ENST00000384596 114 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 MIR491-201ENST00000384877 84 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 EIF4EP2-201ENST00000422816 654 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 RPL39P29-201ENST00000447779 157 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AIG1P1-201ENST00000503376 148 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-120P-201ENST00000516077 103 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AC090616.3-201ENST00000582184 217 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 RPS15AP11-201ENST00000594193 385 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AL353621.2-201ENST00000605340 133 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-91P-201ENST00000607774 107 ntBASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.23□□□□□ -1.89
CDK5RAP3Q96JB5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 Y_RNA.197-201ENST00000364004 102 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-461P-201ENST00000364195 107 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 SNORD32A-201ENST00000364805 84 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-1222P-201ENST00000384615 107 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 SNORA48.5-201ENST00000391143 135 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 U3.26-201ENST00000391236 204 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 MIR1302-11-201ENST00000408051 138 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 MIR1302-9-201ENST00000408365 138 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 MIR1302-10-201ENST00000408734 138 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC096664.2-201ENST00000411843 406 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC005534.2-201ENST00000431047 433 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AL353997.1-201ENST00000432936 108 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 Y_RNA.639-201ENST00000458981 102 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 snoU13.22-201ENST00000459428 104 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC022447.4-201ENST00000504053 364 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC022493.2-201ENST00000506122 481 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 AC091874.1-201ENST00000511402 339 ntBASIC3.22□□□□□ -1.89
CDK5RAP3Q96JB5 RNU6-470P-201ENST00000515954 104 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms