RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 AEBP2Q6ZN18 517 aaPredicted RBP11.75□□□□□ -0.53
CKS1BP7-201ENST00000522230 CHIC1Q5VXU3 224 aa11.6□□□□□ -0.55
CKS1BP7-201ENST00000522230 PHF23Q9BUL5 403 aaPredicted RBP10.3□□□□□ -0.76
CKS1BP7-201ENST00000522230 SENP3Q9H4L4 574 aaPredicted RBP9.81□□□□□ -0.84
CKS1BP7-201ENST00000522230 PLPPR3Q6T4P5 718 aa9.48□□□□□ -0.89
CKS1BP7-201ENST00000522230 FOXD1Q16676 465 aa9.17□□□□□ -0.94
CKS1BP7-201ENST00000522230 ADRA2BP18089 450 aa9.04□□□□□ -0.96
CKS1BP7-201ENST00000522230 PPP6R1Q9UPN7 881 aa9.03□□□□□ -0.96
CKS1BP7-201ENST00000522230 PIAS4Q8N2W9 510 aaPredicted RBP8.68□□□□□ -1.02
CKS1BP7-201ENST00000522230 KCNA4P22459 653 aa8.53□□□□□ -1.04
CKS1BP7-201ENST00000522230 PPP4R3CPQ6ZMV5 832 aa8.43□□□□□ -1.06
CKS1BP7-201ENST00000522230 MSH5O43196 834 aa8.26□□□□□ -1.09
CKS1BP7-201ENST00000522230 EHMT2Q96KQ7 1210 aa8.22□□□□□ -1.09
CKS1BP7-201ENST00000522230 NCBP3Q53F19 620 aaKnown RBP8.19□□□□□ -1.1
CKS1BP7-201ENST00000522230 NPM3O75607 178 aaKnown RBP8.17□□□□□ -1.1
CKS1BP7-201ENST00000522230 MAPK8IP2Q13387 824 aaPredicted RBP8.16□□□□□ -1.1
CKS1BP7-201ENST00000522230 SLC4A1APQ9BWU0 796 aaKnown RBP8.12□□□□□ -1.11
CKS1BP7-201ENST00000522230 SCAF1Q9H7N4 1312 aaKnown RBP8.1□□□□□ -1.11
CKS1BP7-201ENST00000522230 CNKSR2Q8WXI2 1034 aa8.1□□□□□ -1.11
CKS1BP7-201ENST00000522230 CSRNP3Q8WYN3 585 aa7.98□□□□□ -1.13
CKS1BP7-201ENST00000522230 ZBTB22O15209 634 aa7.89□□□□□ -1.15
CKS1BP7-201ENST00000522230 DMRT2Q9Y5R5 561 aa7.89□□□□□ -1.15
CKS1BP7-201ENST00000522230 RNF216Q9NWF9 866 aaPredicted RBP7.87□□□□□ -1.15
CKS1BP7-201ENST00000522230 HOXD11P31277 338 aaPredicted RBP7.8□□□□□ -1.16
CKS1BP7-201ENST00000522230 DNAJC5BQ9UF47 199 aa7.75□□□□□ -1.17
CKS1BP7-201ENST00000522230 FOXD4L1Q9NU39 408 aa7.72□□□□□ -1.17
CKS1BP7-201ENST00000522230 SLC4A2P04920 1241 aa7.68□□□□□ -1.18
CKS1BP7-201ENST00000522230 DCAF8L1A6NGE4 600 aa7.62□□□□□ -1.19
CKS1BP7-201ENST00000522230 MYCNP04198 464 aaPredicted RBP7.48□□□□□ -1.21
CKS1BP7-201ENST00000522230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.47□□□□□ -1.21
CKS1BP7-201ENST00000522230 U3KPZ7 1027 aaPredicted RBP7.4□□□□□ -1.22
CKS1BP7-201ENST00000522230 ATF5Q9Y2D1 282 aaPredicted RBP7.39□□□□□ -1.23
CKS1BP7-201ENST00000522230 ATXN8OSP0DMR3 200 aa7.36□□□□□ -1.23
CKS1BP7-201ENST00000522230 SAMD1Q6SPF0 538 aaPredicted RBP7.26□□□□□ -1.25
CKS1BP7-201ENST00000522230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.24□□□□□ -1.25
CKS1BP7-201ENST00000522230 HNRNPUL2Q1KMD3 747 aaKnown RBP7.24□□□□□ -1.25
CKS1BP7-201ENST00000522230 POTEDQ86YR6 584 aa7.24□□□□□ -1.25
CKS1BP7-201ENST00000522230 FKBP8Q14318 412 aa7.21□□□□□ -1.26
CKS1BP7-201ENST00000522230 SPINK5Q9NQ38 1064 aaPredicted RBP7.17□□□□□ -1.26
CKS1BP7-201ENST00000522230 ZNF219Q9P2Y4 722 aaPredicted RBP7.16□□□□□ -1.26
CKS1BP7-201ENST00000522230 RNF39Q9H2S5 420 aa7.15□□□□□ -1.26
CKS1BP7-201ENST00000522230 TRHP20396 242 aaPredicted RBP7.12□□□□□ -1.27
CKS1BP7-201ENST00000522230 APLP2Q06481 763 aa7.1□□□□□ -1.27
CKS1BP7-201ENST00000522230 CAPN15O75808 1086 aa7.09□□□□□ -1.27
CKS1BP7-201ENST00000522230 MKRN4PQ13434 485 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP7-201ENST00000522230 ABCB7O75027 752 aa7.03□□□□□ -1.28
CKS1BP7-201ENST00000522230 POLA2Q14181 598 aa7.03□□□□□ -1.28
CKS1BP7-201ENST00000522230 C1QBPQ07021 282 aaKnown RBP7.02□□□□□ -1.29
CKS1BP7-201ENST00000522230 RTN4Q9NQC3 1192 aaKnown RBP6.97□□□□□ -1.29
CKS1BP7-201ENST00000522230 SPDYE4A6NLX3 237 aa6.95□□□□□ -1.3
CKS1BP7-201ENST00000522230 FBLN2P98095 1184 aa6.94□□□□□ -1.3
CKS1BP7-201ENST00000522230 DSG3P32926 999 aa6.9□□□□□ -1.3
CKS1BP7-201ENST00000522230 AMER1Q5JTC6 1135 aaPredicted RBP6.87□□□□□ -1.31
CKS1BP7-201ENST00000522230 PROM2Q8N271 834 aa6.83□□□□□ -1.32
CKS1BP7-201ENST00000522230 CACNB1Q02641 598 aaPredicted RBP6.82□□□□□ -1.32
CKS1BP7-201ENST00000522230 OSCARQ8IYS5 282 aa6.82□□□□□ -1.32
CKS1BP7-201ENST00000522230 ZBTB12Q9Y330 459 aaPredicted RBP6.81□□□□□ -1.32
CKS1BP7-201ENST00000522230 FBXO3Q9UK99 471 aa6.77□□□□□ -1.33
CKS1BP7-201ENST00000522230 VASPP50552 380 aaPredicted RBP6.75□□□□□ -1.33
CKS1BP7-201ENST00000522230 ZNF692Q9BU19 519 aaPredicted RBP6.75□□□□□ -1.33
CKS1BP7-201ENST00000522230 IFNLR1Q8IU57 520 aaPredicted RBP6.71□□□□□ -1.34
CKS1BP7-201ENST00000522230 SPDYE2BA6NHP3 402 aa6.7□□□□□ -1.34
CKS1BP7-201ENST00000522230 SPDYE6P0CI01 402 aa6.7□□□□□ -1.34
CKS1BP7-201ENST00000522230 SPDYE2Q495Y8 402 aa6.7□□□□□ -1.34
CKS1BP7-201ENST00000522230 SSUH2Q9Y2M2 353 aa6.7□□□□□ -1.34
CKS1BP7-201ENST00000522230 PABPN1Q86U42 306 aaKnown RBP eCLIP6.69□□□□□ -1.34
CKS1BP7-201ENST00000522230 SLC24A1O60721 1099 aa6.6□□□□□ -1.35
CKS1BP7-201ENST00000522230 KLHL34Q8N239 644 aa6.59□□□□□ -1.35
CKS1BP7-201ENST00000522230 PLCD3Q8N3E9 789 aa6.58□□□□□ -1.36
CKS1BP7-201ENST00000522230 PKD2Q13563 968 aa6.57□□□□□ -1.36
CKS1BP7-201ENST00000522230 STAG3Q9UJ98 1225 aa6.57□□□□□ -1.36
CKS1BP7-201ENST00000522230 MIER1Q8N108 512 aa6.56□□□□□ -1.36
CKS1BP7-201ENST00000522230 SPOCK2Q92563 424 aa6.54□□□□□ -1.36
CKS1BP7-201ENST00000522230 DCAF8L2P0C7V8 631 aa6.53□□□□□ -1.36
CKS1BP7-201ENST00000522230 CLEC11AQ9Y240 323 aa6.49□□□□□ -1.37
CKS1BP7-201ENST00000522230 AKT1S1Q96B36 256 aa6.48□□□□□ -1.37
CKS1BP7-201ENST00000522230 RBM42Q9BTD8 480 aaKnown RBP6.48□□□□□ -1.37
CKS1BP7-201ENST00000522230 ECM2O94769 699 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP7-201ENST00000522230 REM2Q8IYK8 340 aaPredicted RBP6.47□□□□□ -1.37
CKS1BP7-201ENST00000522230 SPDYE1Q8NFV5 336 aaPredicted RBP6.45□□□□□ -1.38
CKS1BP7-201ENST00000522230 CIZ1Q9ULV3 898 aaPredicted RBP6.45□□□□□ -1.38
CKS1BP7-201ENST00000522230 RGL2O15211 777 aa6.44□□□□□ -1.38
CKS1BP7-201ENST00000522230 PITPNM1O00562 1244 aa6.42□□□□□ -1.38
CKS1BP7-201ENST00000522230 PLEKHG5O94827 1062 aa6.42□□□□□ -1.38
CKS1BP7-201ENST00000522230 CREBZFQ9NS37 354 aa6.42□□□□□ -1.38
CKS1BP7-201ENST00000522230 NPM1P06748 294 aaKnown RBP eCLIP6.41□□□□□ -1.38
CKS1BP7-201ENST00000522230 PRR29P0C7W0 189 aa6.41□□□□□ -1.38
CKS1BP7-201ENST00000522230 PLCB2Q00722 1185 aa6.39□□□□□ -1.39
CKS1BP7-201ENST00000522230 ZBTB47Q9UFB7 747 aaPredicted RBP6.39□□□□□ -1.39
CKS1BP7-201ENST00000522230 NUBP1P53384 320 aa6.38□□□□□ -1.39
CKS1BP7-201ENST00000522230 MNX1P50219 401 aaPredicted RBP6.37□□□□□ -1.39
CKS1BP7-201ENST00000522230 CHADLQ6NUI6 762 aa6.36□□□□□ -1.39
CKS1BP7-201ENST00000522230 HAP1P54257 671 aaPredicted RBP6.35□□□□□ -1.39
CKS1BP7-201ENST00000522230 DCAF8Q5TAQ9 597 aa6.34□□□□□ -1.39
CKS1BP7-201ENST00000522230 RASEFQ8IZ41 740 aa6.34□□□□□ -1.39
CKS1BP7-201ENST00000522230 RNF25Q96BH1 459 aaPredicted RBP6.33□□□□□ -1.4
CKS1BP7-201ENST00000522230 CHGAP10645 457 aaKnown RBP6.31□□□□□ -1.4
CKS1BP7-201ENST00000522230 GSE1Q14687 1217 aa6.3□□□□□ -1.4
CKS1BP7-201ENST00000522230 PAXIP1Q6ZW49 1069 aaPredicted RBP6.3□□□□□ -1.4
CKS1BP7-201ENST00000522230 CFAP44Q96MT7 982 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms