Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC016909.1-201ENST00000415916 166 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.04□□□□□ -1.28
NCBP3Q53F19 RNA5SP310-201ENST00000459084 116 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 RPL21P129-201ENST00000491732 478 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 RNA5SP362-201ENST00000516048 118 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 AC040958.1-201ENST00000561102 201 ntBASIC7.04□□□□□ -1.28
NCBP3Q53F19 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.04□□□□□ -1.28
NCBP3Q53F19 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NCBP3Q53F19 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NCBP3Q53F19 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NCBP3Q53F19 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NCBP3Q53F19 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NCBP3Q53F19 RNU1-19P-201ENST00000363306 165 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 RN7SKP160-201ENST00000363804 340 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 RNU6-979P-201ENST00000383896 107 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 RNA5SP241-201ENST00000391326 114 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 RPL35AP21-201ENST00000437667 333 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 RN7SKP66-201ENST00000516681 231 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 RNU6-1096P-201ENST00000517089 102 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 IGKV2-18-201ENST00000522607 343 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 AL390726.5-202ENST00000564800 256 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 RN7SL703P-201ENST00000578485 302 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 MIR5588-201ENST00000581890 63 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 MIR6839-201ENST00000620425 113 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NCBP3Q53F19 AF117829.1-206ENST00000621883 3802 ntBASIC7.03□□□□□ -1.28
NCBP3Q53F19 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NCBP3Q53F19 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC7.03□□□□□ -1.28
NCBP3Q53F19 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NCBP3Q53F19 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.02□□□□□ -1.29
NCBP3Q53F19 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC7.02□□□□□ -1.29
NCBP3Q53F19 Y_RNA.10-201ENST00000362371 110 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 RNU6-24P-201ENST00000384440 107 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NCBP3Q53F19 RPL21P65-201ENST00000406094 466 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 MIR1294-201ENST00000408503 142 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 RN7SL814P-201ENST00000487715 300 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 RNU7-123P-201ENST00000515911 60 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 RNU6-795P-201ENST00000516323 103 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 HMGB1P40-201ENST00000525121 540 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 MIR4666B-201ENST00000578142 81 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 AC090517.3-201ENST00000625170 141 ntBASIC7.02□□□□□ -1.29
NCBP3Q53F19 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NCBP3Q53F19 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NCBP3Q53F19 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
NCBP3Q53F19 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NCBP3Q53F19 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC7.01□□□□□ -1.29
NCBP3Q53F19 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NCBP3Q53F19 RN7SKP153-201ENST00000365026 316 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 RNU6-675P-201ENST00000384236 104 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 MIR518F-201ENST00000384973 87 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 SNRPGP10-201ENST00000432323 225 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 AC109329.2-201ENST00000519658 482 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 AP001880.2-201ENST00000538233 448 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 AC019288.1-201ENST00000557918 224 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 IMMP1LP3-201ENST00000604197 224 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 MIR4662A-201ENST00000637499 67 ntBASIC7.01□□□□□ -1.29
NCBP3Q53F19 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.01□□□□□ -1.29
NCBP3Q53F19 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
NCBP3Q53F19 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NCBP3Q53F19 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NCBP3Q53F19 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
NCBP3Q53F19 SNORA70.6-201ENST00000383934 134 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC7□□□□□ -1.29
NCBP3Q53F19 AL451046.2-201ENST00000403074 277 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 RNU6-402P-201ENST00000410678 103 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 HMGN1P7-201ENST00000491722 313 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 AC004486.1-201ENST00000546846 233 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC7□□□□□ -1.29
NCBP3Q53F19 MIR4489-201ENST00000578869 62 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 AC022217.4-201ENST00000604389 163 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 MIR6837-201ENST00000620884 64 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 AC074101.1-201ENST00000637861 241 ntBASIC7□□□□□ -1.29
NCBP3Q53F19 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
NCBP3Q53F19 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
NCBP3Q53F19 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
NCBP3Q53F19 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
NCBP3Q53F19 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
NCBP3Q53F19 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NCBP3Q53F19 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC6.99□□□□□ -1.29
NCBP3Q53F19 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NCBP3Q53F19 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.99□□□□□ -1.29
NCBP3Q53F19 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 RNA5SP307-201ENST00000362863 116 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 Y_RNA.531-201ENST00000384589 121 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.99□□□□□ -1.29
NCBP3Q53F19 RNU7-6P-201ENST00000516845 62 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 RNU7-70P-201ENST00000516941 66 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 AC079598.5-201ENST00000547460 117 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 MIR4443-201ENST00000585052 53 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 AC008507.4-201ENST00000585464 127 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 AC012531.4-201ENST00000616509 177 ntBASIC6.99□□□□□ -1.29
NCBP3Q53F19 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NCBP3Q53F19 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms