Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR6837-201ENST00000620884 64 ntBASIC5.54□□□□□ -1.52
CD44P16070 AC006435.5-201ENST00000624486 112 ntBASIC5.54□□□□□ -1.52
CD44P16070 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CD44P16070 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CD44P16070 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CD44P16070 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.54□□□□□ -1.52
CD44P16070 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CD44P16070 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.53□□□□□ -1.52
CD44P16070 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.53□□□□□ -1.52
CD44P16070 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CD44P16070 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.53□□□□□ -1.52
CD44P16070 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.53□□□□□ -1.52
CD44P16070 AL391987.1-201ENST00000441025 200 ntBASIC5.53□□□□□ -1.52
CD44P16070 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.53□□□□□ -1.52
CD44P16070 RN7SL174P-201ENST00000475578 289 ntBASIC5.53□□□□□ -1.52
CD44P16070 BX284632.1-201ENST00000478218 541 ntBASIC5.53□□□□□ -1.52
CD44P16070 RPS23P4-201ENST00000487908 423 ntBASIC5.53□□□□□ -1.52
CD44P16070 AC027308.1-201ENST00000517993 110 ntBASIC5.53□□□□□ -1.52
CD44P16070 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 HIGD1AP1-201ENST00000550979 275 ntBASIC5.53□□□□□ -1.52
CD44P16070 RPL17P51-201ENST00000605218 238 ntBASIC5.53□□□□□ -1.52
CD44P16070 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 AC011944.2-201ENST00000624440 683 ntBASIC5.53□□□□□ -1.52
CD44P16070 AL049767.1-202ENST00000637826 242 ntBASIC5.53□□□□□ -1.52
CD44P16070 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CD44P16070 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD44P16070 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD44P16070 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CD44P16070 AC009963.2-201ENST00000453431 138 ntBASIC5.52□□□□□ -1.53
CD44P16070 RPS3P1-201ENST00000456781 192 ntBASIC5.52□□□□□ -1.53
CD44P16070 AC023424.1-201ENST00000496058 459 ntBASIC5.52□□□□□ -1.53
CD44P16070 RPL23AP63-201ENST00000498752 471 ntBASIC5.52□□□□□ -1.53
CD44P16070 BX510359.5-201ENST00000515651 304 ntBASIC5.52□□□□□ -1.53
CD44P16070 AP004371.1-201ENST00000525240 214 ntBASIC5.52□□□□□ -1.53
CD44P16070 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CD44P16070 AC021739.1-201ENST00000559631 174 ntBASIC5.52□□□□□ -1.53
CD44P16070 MIR3117-201ENST00000584034 78 ntBASIC5.52□□□□□ -1.53
CD44P16070 AL591926.8-201ENST00000616876 211 ntBASIC5.52□□□□□ -1.53
CD44P16070 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CD44P16070 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.52□□□□□ -1.53
CD44P16070 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CD44P16070 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.52□□□□□ -1.53
CD44P16070 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CD44P16070 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CD44P16070 AC133552.1-201ENST00000569988 4007 ntBASIC5.51□□□□□ -1.53
CD44P16070 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.51□□□□□ -1.53
CD44P16070 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD44P16070 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD44P16070 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.51□□□□□ -1.53
CD44P16070 AC010266.2-201ENST00000564741 3255 ntBASIC5.51□□□□□ -1.53
CD44P16070 Y_RNA.386-201ENST00000383913 105 ntBASIC5.51□□□□□ -1.53
CD44P16070 SNORA1.3-201ENST00000384676 136 ntBASIC5.51□□□□□ -1.53
CD44P16070 MIR143-201ENST00000385300 106 ntBASIC5.51□□□□□ -1.53
CD44P16070 MIR3065-201ENST00000390137 79 ntBASIC5.51□□□□□ -1.53
CD44P16070 RNU6-1282P-201ENST00000516735 96 ntBASIC5.51□□□□□ -1.53
CD44P16070 RNA5SP392-201ENST00000516905 112 ntBASIC5.51□□□□□ -1.53
CD44P16070 AP001880.2-201ENST00000538233 448 ntBASIC5.51□□□□□ -1.53
CD44P16070 AC140658.3-201ENST00000567603 271 ntBASIC5.51□□□□□ -1.53
CD44P16070 CYCSP40-201ENST00000575927 294 ntBASIC5.51□□□□□ -1.53
CD44P16070 AL110115.1-201ENST00000614396 364 ntBASIC5.51□□□□□ -1.53
CD44P16070 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.51□□□□□ -1.53
CD44P16070 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.51□□□□□ -1.53
CD44P16070 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD44P16070 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD44P16070 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.51□□□□□ -1.53
CD44P16070 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.51□□□□□ -1.53
CD44P16070 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD44P16070 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.51□□□□□ -1.53
CD44P16070 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD44P16070 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.5□□□□□ -1.53
CD44P16070 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.5□□□□□ -1.53
CD44P16070 SALL4P2-201ENST00000423288 2910 ntBASIC5.5□□□□□ -1.53
CD44P16070 MIR323A-201ENST00000362199 86 ntBASIC5.5□□□□□ -1.53
CD44P16070 SNORA14A-201ENST00000364773 135 ntBASIC5.5□□□□□ -1.53
CD44P16070 SDHCP2-201ENST00000398565 501 ntBASIC5.5□□□□□ -1.53
CD44P16070 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.5□□□□□ -1.53
CD44P16070 RNU6-871P-201ENST00000516122 100 ntBASIC5.5□□□□□ -1.53
CD44P16070 RNA5SP249-201ENST00000516127 99 ntBASIC5.5□□□□□ -1.53
CD44P16070 RN7SKP66-201ENST00000516681 231 ntBASIC5.5□□□□□ -1.53
CD44P16070 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.5□□□□□ -1.53
CD44P16070 MIR4472-2-201ENST00000582069 67 ntBASIC5.5□□□□□ -1.53
CD44P16070 AC095038.3-201ENST00000634439 195 ntBASIC5.5□□□□□ -1.53
CD44P16070 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CD44P16070 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD44P16070 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD44P16070 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.5□□□□□ -1.53
CD44P16070 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD44P16070 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD44P16070 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD44P16070 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD44P16070 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD44P16070 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD44P16070 AL590240.1-201ENST00000334118 313 ntBASIC5.49□□□□□ -1.53
CD44P16070 SNORA40.18-201ENST00000391200 128 ntBASIC5.49□□□□□ -1.53
CD44P16070 CKS1BP6-201ENST00000424932 240 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms