Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC145138.1-201ENST00000512908 2851 ntBASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC245505.2-201ENST00000553572 3055 ntBASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-11Q9BYQ6 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL353807.3-201ENST00000500626 2505 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU1-43P-201ENST00000365052 165 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU6-203P-201ENST00000384038 104 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 Z74021.1-201ENST00000423610 407 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC017083.1-201ENST00000428093 483 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 snoU13.13-201ENST00000458842 104 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC084357.1-201ENST00000473404 255 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RN7SL826P-201ENST00000479724 288 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RN7SL636P-201ENST00000497504 294 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF519P4-201ENST00000514008 125 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNA5SP445-201ENST00000515889 115 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU7-151P-201ENST00000516930 53 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR3609-201ENST00000582661 80 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR7155-201ENST00000615925 56 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 U1.41-201ENST00000617626 165 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AP005212.3-201ENST00000619964 528 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-11Q9BYQ6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms