Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNA5SP340-201ENST00000517132 107 ntBASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 AC068631.3-201ENST00000538831 225 ntBASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 CIPC-206ENST00000555611 599 ntTSL 4 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 RN7SL786P-201ENST00000579130 298 ntBASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-3Q9BYR6 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 RNU1-21P-201ENST00000363327 163 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 RNA5SP512-201ENST00000364550 120 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 MIR526A1-201ENST00000384897 85 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 MIR541-201ENST00000401360 84 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 AL023284.1-201ENST00000403956 276 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 AL606490.4-201ENST00000423117 127 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 AC064862.4-201ENST00000442180 334 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 RN7SL306P-201ENST00000492941 296 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 RNU7-43P-201ENST00000516554 64 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 AC209154.1-201ENST00000582156 337 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 MIR4470-201ENST00000583453 72 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 RPSAP66-201ENST00000592196 606 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 MTRNR2L2-201ENST00000604882 87 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 U6.100-201ENST00000636230 99 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 AC011471.4-201ENST00000638271 216 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 AC007159.1-201ENST00000566529 4706 ntBASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-3Q9BYR6 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 RNU6-645P-201ENST00000364649 106 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 RNA5SP396-201ENST00000364834 120 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 MIR592-201ENST00000384959 97 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 BMS1P17-202ENST00000416720 316 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 AC130472.1-201ENST00000427885 309 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 HSPE1P9-201ENST00000440046 311 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 RN7SL688P-201ENST00000471754 275 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 RN7SL563P-201ENST00000481233 298 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 RN7SL561P-201ENST00000488553 281 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 AC127024.1-201ENST00000490847 418 ntBASIC3.41□□□□□ -1.86
KRTAP3-3Q9BYR6 RN7SL143P-201ENST00000496780 297 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms