RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 AEBP2Q6ZN18 517 aaPredicted RBP7.89□□□□□ -1.15
TRAJ41-201ENST00000390496 CHIC1Q5VXU3 224 aa7.77□□□□□ -1.17
TRAJ41-201ENST00000390496 PHF23Q9BUL5 403 aaPredicted RBP6.93□□□□□ -1.3
TRAJ41-201ENST00000390496 SENP3Q9H4L4 574 aaPredicted RBP6.52□□□□□ -1.37
TRAJ41-201ENST00000390496 PLPPR3Q6T4P5 718 aa6.32□□□□□ -1.4
TRAJ41-201ENST00000390496 FOXD1Q16676 465 aa6.13□□□□□ -1.43
TRAJ41-201ENST00000390496 ADRA2BP18089 450 aa6.07□□□□□ -1.44
TRAJ41-201ENST00000390496 PPP6R1Q9UPN7 881 aa6.06□□□□□ -1.44
TRAJ41-201ENST00000390496 PIAS4Q8N2W9 510 aaPredicted RBP5.79□□□□□ -1.48
TRAJ41-201ENST00000390496 KCNA4P22459 653 aa5.75□□□□□ -1.49
TRAJ41-201ENST00000390496 PPP4R3CPQ6ZMV5 832 aa5.64□□□□□ -1.51
TRAJ41-201ENST00000390496 EHMT2Q96KQ7 1210 aa5.56□□□□□ -1.52
TRAJ41-201ENST00000390496 NPM3O75607 178 aaKnown RBP5.49□□□□□ -1.53
TRAJ41-201ENST00000390496 MSH5O43196 834 aa5.48□□□□□ -1.53
TRAJ41-201ENST00000390496 MAPK8IP2Q13387 824 aaPredicted RBP5.46□□□□□ -1.54
TRAJ41-201ENST00000390496 SLC4A1APQ9BWU0 796 aaKnown RBP5.45□□□□□ -1.54
TRAJ41-201ENST00000390496 NCBP3Q53F19 620 aaKnown RBP5.43□□□□□ -1.54
TRAJ41-201ENST00000390496 CNKSR2Q8WXI2 1034 aa5.4□□□□□ -1.54
TRAJ41-201ENST00000390496 CSRNP3Q8WYN3 585 aa5.39□□□□□ -1.55
TRAJ41-201ENST00000390496 ZBTB22O15209 634 aa5.36□□□□□ -1.55
TRAJ41-201ENST00000390496 SCAF1Q9H7N4 1312 aaKnown RBP5.34□□□□□ -1.55
TRAJ41-201ENST00000390496 DMRT2Q9Y5R5 561 aa5.27□□□□□ -1.57
TRAJ41-201ENST00000390496 RNF216Q9NWF9 866 aaPredicted RBP5.26□□□□□ -1.57
TRAJ41-201ENST00000390496 HOXD11P31277 338 aaPredicted RBP5.22□□□□□ -1.57
TRAJ41-201ENST00000390496 DNAJC5BQ9UF47 199 aa5.2□□□□□ -1.58
TRAJ41-201ENST00000390496 FOXD4L1Q9NU39 408 aa5.18□□□□□ -1.58
TRAJ41-201ENST00000390496 SLC4A2P04920 1241 aa5.17□□□□□ -1.58
TRAJ41-201ENST00000390496 DCAF8L1A6NGE4 600 aa5.04□□□□□ -1.6
TRAJ41-201ENST00000390496 MYCNP04198 464 aaPredicted RBP5□□□□□ -1.61
TRAJ41-201ENST00000390496 ATF5Q9Y2D1 282 aaPredicted RBP4.99□□□□□ -1.61
TRAJ41-201ENST00000390496 U3KPZ7 1027 aaPredicted RBP4.97□□□□□ -1.61
TRAJ41-201ENST00000390496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.95□□□□□ -1.62
TRAJ41-201ENST00000390496 ATXN8OSP0DMR3 200 aa4.91□□□□□ -1.62
TRAJ41-201ENST00000390496 FKBP8Q14318 412 aa4.85□□□□□ -1.63
TRAJ41-201ENST00000390496 SAMD1Q6SPF0 538 aaPredicted RBP4.82□□□□□ -1.64
TRAJ41-201ENST00000390496 POTEDQ86YR6 584 aa4.81□□□□□ -1.64
TRAJ41-201ENST00000390496 SPINK5Q9NQ38 1064 aaPredicted RBP4.81□□□□□ -1.64
TRAJ41-201ENST00000390496 ZNF219Q9P2Y4 722 aaPredicted RBP4.79□□□□□ -1.64
TRAJ41-201ENST00000390496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.78□□□□□ -1.64
TRAJ41-201ENST00000390496 HNRNPUL2Q1KMD3 747 aaKnown RBP4.78□□□□□ -1.64
TRAJ41-201ENST00000390496 RNF39Q9H2S5 420 aa4.78□□□□□ -1.64
TRAJ41-201ENST00000390496 MKRN4PQ13434 485 aaPredicted RBP4.76□□□□□ -1.65
TRAJ41-201ENST00000390496 RTN4Q9NQC3 1192 aaKnown RBP4.75□□□□□ -1.65
TRAJ41-201ENST00000390496 TRHP20396 242 aaPredicted RBP4.74□□□□□ -1.65
TRAJ41-201ENST00000390496 CAPN15O75808 1086 aa4.71□□□□□ -1.66
TRAJ41-201ENST00000390496 ABCB7O75027 752 aa4.7□□□□□ -1.66
TRAJ41-201ENST00000390496 APLP2Q06481 763 aa4.68□□□□□ -1.66
TRAJ41-201ENST00000390496 POLA2Q14181 598 aa4.68□□□□□ -1.66
TRAJ41-201ENST00000390496 SPDYE4A6NLX3 237 aa4.65□□□□□ -1.67
TRAJ41-201ENST00000390496 C1QBPQ07021 282 aaKnown RBP4.65□□□□□ -1.67
TRAJ41-201ENST00000390496 AMER1Q5JTC6 1135 aaPredicted RBP4.62□□□□□ -1.67
TRAJ41-201ENST00000390496 PROM2Q8N271 834 aa4.62□□□□□ -1.67
TRAJ41-201ENST00000390496 DSG3P32926 999 aa4.61□□□□□ -1.67
TRAJ41-201ENST00000390496 FBLN2P98095 1184 aa4.6□□□□□ -1.67
TRAJ41-201ENST00000390496 OSCARQ8IYS5 282 aa4.58□□□□□ -1.68
TRAJ41-201ENST00000390496 VASPP50552 380 aaPredicted RBP4.54□□□□□ -1.68
TRAJ41-201ENST00000390496 IFNLR1Q8IU57 520 aaPredicted RBP4.53□□□□□ -1.68
TRAJ41-201ENST00000390496 ZBTB12Q9Y330 459 aaPredicted RBP4.52□□□□□ -1.69
TRAJ41-201ENST00000390496 CACNB1Q02641 598 aaPredicted RBP4.5□□□□□ -1.69
TRAJ41-201ENST00000390496 SSUH2Q9Y2M2 353 aa4.5□□□□□ -1.69
TRAJ41-201ENST00000390496 SLC24A1O60721 1099 aa4.49□□□□□ -1.69
TRAJ41-201ENST00000390496 FBXO3Q9UK99 471 aa4.49□□□□□ -1.69
TRAJ41-201ENST00000390496 ZNF692Q9BU19 519 aaPredicted RBP4.48□□□□□ -1.69
TRAJ41-201ENST00000390496 PABPN1Q86U42 306 aaKnown RBP eCLIP4.47□□□□□ -1.69
TRAJ41-201ENST00000390496 SPDYE2BA6NHP3 402 aa4.45□□□□□ -1.7
TRAJ41-201ENST00000390496 SPDYE6P0CI01 402 aa4.45□□□□□ -1.7
TRAJ41-201ENST00000390496 SPDYE2Q495Y8 402 aa4.45□□□□□ -1.7
TRAJ41-201ENST00000390496 PKD2Q13563 968 aa4.44□□□□□ -1.7
TRAJ41-201ENST00000390496 DCAF8L2P0C7V8 631 aa4.37□□□□□ -1.71
TRAJ41-201ENST00000390496 KLHL34Q8N239 644 aa4.37□□□□□ -1.71
TRAJ41-201ENST00000390496 SPOCK2Q92563 424 aa4.37□□□□□ -1.71
TRAJ41-201ENST00000390496 PLCD3Q8N3E9 789 aa4.36□□□□□ -1.71
TRAJ41-201ENST00000390496 MIER1Q8N108 512 aa4.35□□□□□ -1.71
TRAJ41-201ENST00000390496 STAG3Q9UJ98 1225 aa4.35□□□□□ -1.71
TRAJ41-201ENST00000390496 RGL2O15211 777 aa4.34□□□□□ -1.71
TRAJ41-201ENST00000390496 NPM1P06748 294 aaKnown RBP eCLIP4.34□□□□□ -1.71
TRAJ41-201ENST00000390496 ECM2O94769 699 aaPredicted RBP4.33□□□□□ -1.72
TRAJ41-201ENST00000390496 PLCB2Q00722 1185 aa4.31□□□□□ -1.72
TRAJ41-201ENST00000390496 REM2Q8IYK8 340 aaPredicted RBP4.31□□□□□ -1.72
TRAJ41-201ENST00000390496 CREBZFQ9NS37 354 aa4.31□□□□□ -1.72
TRAJ41-201ENST00000390496 PITPNM1O00562 1244 aa4.3□□□□□ -1.72
TRAJ41-201ENST00000390496 MNX1P50219 401 aaPredicted RBP4.3□□□□□ -1.72
TRAJ41-201ENST00000390496 AKT1S1Q96B36 256 aa4.3□□□□□ -1.72
TRAJ41-201ENST00000390496 RNF25Q96BH1 459 aaPredicted RBP4.3□□□□□ -1.72
TRAJ41-201ENST00000390496 CIZ1Q9ULV3 898 aaPredicted RBP4.3□□□□□ -1.72
TRAJ41-201ENST00000390496 CLEC11AQ9Y240 323 aa4.3□□□□□ -1.72
TRAJ41-201ENST00000390496 NUBP1P53384 320 aa4.29□□□□□ -1.72
TRAJ41-201ENST00000390496 SPDYE1Q8NFV5 336 aaPredicted RBP4.28□□□□□ -1.72
TRAJ41-201ENST00000390496 RBM42Q9BTD8 480 aaKnown RBP4.28□□□□□ -1.72
TRAJ41-201ENST00000390496 HAP1P54257 671 aaPredicted RBP4.27□□□□□ -1.73
TRAJ41-201ENST00000390496 RASEFQ8IZ41 740 aa4.27□□□□□ -1.73
TRAJ41-201ENST00000390496 CHADLQ6NUI6 762 aa4.25□□□□□ -1.73
TRAJ41-201ENST00000390496 PRR29P0C7W0 189 aa4.24□□□□□ -1.73
TRAJ41-201ENST00000390496 CHGAP10645 457 aaKnown RBP4.23□□□□□ -1.73
TRAJ41-201ENST00000390496 PAXIP1Q6ZW49 1069 aaPredicted RBP4.23□□□□□ -1.73
TRAJ41-201ENST00000390496 ZBTB47Q9UFB7 747 aaPredicted RBP4.23□□□□□ -1.73
TRAJ41-201ENST00000390496 PLEKHG5O94827 1062 aa4.22□□□□□ -1.73
TRAJ41-201ENST00000390496 BBXQ8WY36 941 aaPredicted RBP4.22□□□□□ -1.73
TRAJ41-201ENST00000390496 CFAP44Q96MT7 982 aa4.22□□□□□ -1.73
TRAJ41-201ENST00000390496 NKX1-1Q15270 411 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms