Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC069528.2-201ENST00000624849 1991 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 RN7SKP104-201ENST00000362605 328 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 RNU6-1131P-201ENST00000364955 107 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 Y_RNA.348-201ENST00000365403 103 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 MIR3074-201ENST00000384885 81 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 U6atac.2-201ENST00000408644 118 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AL691449.1-201ENST00000426570 421 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 Z75741.1-201ENST00000446793 314 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 snoU13.4-201ENST00000458916 104 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AC104339.1-201ENST00000465478 348 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 RNU6-781P-201ENST00000516377 101 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 Y_RNA.690-201ENST00000516603 95 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 RNU6-344P-201ENST00000516635 111 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 RNU1-117P-201ENST00000517041 158 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AC131055.1-201ENST00000584626 316 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 MIR6780B-201ENST00000610307 79 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 MIR548AY-201ENST00000617669 107 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 AC068205.3-201ENST00000636385 468 ntBASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSBP4Q9BWG4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 OR13C1P-202ENST00000641378 2919 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 RNA5SP46-201ENST00000362370 120 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 RNU6-19P-201ENST00000384718 107 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AL603914.1-201ENST00000401964 204 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 SNORA36B-201ENST00000410438 131 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 RNU6-554P-201ENST00000410466 106 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 BX510359.2-201ENST00000417920 305 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AC117454.1-201ENST00000491120 168 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AC006445.2-201ENST00000510061 472 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 SNORA31.8-201ENST00000516327 108 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 RNU6-197P-201ENST00000516680 100 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AL049872.1-201ENST00000556323 322 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 AC090897.2-201ENST00000581715 130 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 MIR6806-201ENST00000622141 64 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 CU639417.4-201ENST00000623928 207 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 U6.115-201ENST00000636045 103 ntBASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.78□□□□□ -1.8
SSBP4Q9BWG4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
SSBP4Q9BWG4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 RNU6-640P-201ENST00000363693 105 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 RNA5SP513-201ENST00000364648 118 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 RNA5SP90-201ENST00000364801 99 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 SNORD96B-201ENST00000386148 79 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 RNU6-1275P-201ENST00000391087 107 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 CBX3P9-201ENST00000402326 552 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 RN7SKP293-201ENST00000411389 296 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 OR2AT2P-201ENST00000413438 905 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 EDDM3CP-201ENST00000415977 425 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 CKS1BP6-201ENST00000424932 240 ntBASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSBP4Q9BWG4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms