RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.53
RNU1-117P-201ENST00000517041 CHIC1Q5VXU3 224 aa11.56□□□□□ -0.56
RNU1-117P-201ENST00000517041 SENP3Q9H4L4 574 aaPredicted RBP10.09□□□□□ -0.79
RNU1-117P-201ENST00000517041 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
RNU1-117P-201ENST00000517041 PLPPR3Q6T4P5 718 aa9.44□□□□□ -0.9
RNU1-117P-201ENST00000517041 FOXD1Q16676 465 aa9.24□□□□□ -0.93
RNU1-117P-201ENST00000517041 PPP6R1Q9UPN7 881 aa8.84□□□□□ -0.99
RNU1-117P-201ENST00000517041 ADRA2BP18089 450 aa8.83□□□□□ -1
RNU1-117P-201ENST00000517041 PIAS4Q8N2W9 510 aaPredicted RBP8.75□□□□□ -1.01
RNU1-117P-201ENST00000517041 MSH5O43196 834 aa8.66□□□□□ -1.02
RNU1-117P-201ENST00000517041 SCAF1Q9H7N4 1312 aaKnown RBP8.28□□□□□ -1.08
RNU1-117P-201ENST00000517041 PPP4R3CPQ6ZMV5 832 aa8.24□□□□□ -1.09
RNU1-117P-201ENST00000517041 NCBP3Q53F19 620 aaKnown RBP8.12□□□□□ -1.11
RNU1-117P-201ENST00000517041 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
RNU1-117P-201ENST00000517041 DMRT2Q9Y5R5 561 aa8.03□□□□□ -1.12
RNU1-117P-201ENST00000517041 KCNA4P22459 653 aa8.01□□□□□ -1.13
RNU1-117P-201ENST00000517041 MAPK8IP2Q13387 824 aaPredicted RBP7.97□□□□□ -1.13
RNU1-117P-201ENST00000517041 RNF216Q9NWF9 866 aaPredicted RBP7.93□□□□□ -1.14
RNU1-117P-201ENST00000517041 NPM3O75607 178 aaKnown RBP7.91□□□□□ -1.14
RNU1-117P-201ENST00000517041 HOXD11P31277 338 aaPredicted RBP7.88□□□□□ -1.15
RNU1-117P-201ENST00000517041 DNAJC5BQ9UF47 199 aa7.88□□□□□ -1.15
RNU1-117P-201ENST00000517041 POTEDQ86YR6 584 aa7.73□□□□□ -1.17
RNU1-117P-201ENST00000517041 SLC4A1APQ9BWU0 796 aaKnown RBP7.69□□□□□ -1.18
RNU1-117P-201ENST00000517041 DCAF8L1A6NGE4 600 aa7.55□□□□□ -1.2
RNU1-117P-201ENST00000517041 FOXD4L1Q9NU39 408 aa7.48□□□□□ -1.21
RNU1-117P-201ENST00000517041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.45□□□□□ -1.22
RNU1-117P-201ENST00000517041 SLC4A2P04920 1241 aa7.44□□□□□ -1.22
RNU1-117P-201ENST00000517041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.39□□□□□ -1.23
RNU1-117P-201ENST00000517041 HNRNPUL2Q1KMD3 747 aaKnown RBP7.39□□□□□ -1.23
RNU1-117P-201ENST00000517041 MYCNP04198 464 aaPredicted RBP7.38□□□□□ -1.23
RNU1-117P-201ENST00000517041 EHMT2Q96KQ7 1210 aa7.38□□□□□ -1.23
RNU1-117P-201ENST00000517041 RNF39Q9H2S5 420 aa7.36□□□□□ -1.23
RNU1-117P-201ENST00000517041 ZBTB22O15209 634 aa7.35□□□□□ -1.23
RNU1-117P-201ENST00000517041 CSRNP3Q8WYN3 585 aa7.35□□□□□ -1.23
RNU1-117P-201ENST00000517041 APLP2Q06481 763 aa7.34□□□□□ -1.23
RNU1-117P-201ENST00000517041 C1QBPQ07021 282 aaKnown RBP7.33□□□□□ -1.24
RNU1-117P-201ENST00000517041 SAMD1Q6SPF0 538 aaPredicted RBP7.33□□□□□ -1.24
RNU1-117P-201ENST00000517041 U3KPZ7 1027 aaPredicted RBP7.33□□□□□ -1.24
RNU1-117P-201ENST00000517041 ATXN8OSP0DMR3 200 aa7.29□□□□□ -1.24
RNU1-117P-201ENST00000517041 ZNF219Q9P2Y4 722 aaPredicted RBP7.16□□□□□ -1.26
RNU1-117P-201ENST00000517041 CACNB1Q02641 598 aaPredicted RBP7.11□□□□□ -1.27
RNU1-117P-201ENST00000517041 CAPN15O75808 1086 aa7.07□□□□□ -1.28
RNU1-117P-201ENST00000517041 SPINK5Q9NQ38 1064 aaPredicted RBP7.05□□□□□ -1.28
RNU1-117P-201ENST00000517041 ATF5Q9Y2D1 282 aaPredicted RBP7.02□□□□□ -1.29
RNU1-117P-201ENST00000517041 TRHP20396 242 aaPredicted RBP7.01□□□□□ -1.29
RNU1-117P-201ENST00000517041 DSG3P32926 999 aa6.98□□□□□ -1.29
RNU1-117P-201ENST00000517041 ZBTB12Q9Y330 459 aaPredicted RBP6.98□□□□□ -1.29
RNU1-117P-201ENST00000517041 POLA2Q14181 598 aa6.92□□□□□ -1.3
RNU1-117P-201ENST00000517041 FBLN2P98095 1184 aa6.88□□□□□ -1.31
RNU1-117P-201ENST00000517041 ABCB7O75027 752 aa6.87□□□□□ -1.31
RNU1-117P-201ENST00000517041 MKRN4PQ13434 485 aaPredicted RBP6.77□□□□□ -1.33
RNU1-117P-201ENST00000517041 RBM42Q9BTD8 480 aaKnown RBP6.76□□□□□ -1.33
RNU1-117P-201ENST00000517041 SPDYE2BA6NHP3 402 aa6.74□□□□□ -1.33
RNU1-117P-201ENST00000517041 SPDYE6P0CI01 402 aa6.74□□□□□ -1.33
RNU1-117P-201ENST00000517041 SPDYE2Q495Y8 402 aa6.74□□□□□ -1.33
RNU1-117P-201ENST00000517041 OSCARQ8IYS5 282 aa6.69□□□□□ -1.34
RNU1-117P-201ENST00000517041 SPDYE4A6NLX3 237 aa6.67□□□□□ -1.34
RNU1-117P-201ENST00000517041 SSUH2Q9Y2M2 353 aa6.67□□□□□ -1.34
RNU1-117P-201ENST00000517041 AKT1S1Q96B36 256 aa6.65□□□□□ -1.34
RNU1-117P-201ENST00000517041 FKBP8Q14318 412 aa6.64□□□□□ -1.35
RNU1-117P-201ENST00000517041 PROM2Q8N271 834 aa6.64□□□□□ -1.35
RNU1-117P-201ENST00000517041 ZNF692Q9BU19 519 aaPredicted RBP6.63□□□□□ -1.35
RNU1-117P-201ENST00000517041 STAG3Q9UJ98 1225 aa6.55□□□□□ -1.36
RNU1-117P-201ENST00000517041 FBXO3Q9UK99 471 aa6.54□□□□□ -1.36
RNU1-117P-201ENST00000517041 PABPN1Q86U42 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
RNU1-117P-201ENST00000517041 SPDYE1Q8NFV5 336 aaPredicted RBP6.53□□□□□ -1.36
RNU1-117P-201ENST00000517041 REM2Q8IYK8 340 aaPredicted RBP6.5□□□□□ -1.37
RNU1-117P-201ENST00000517041 PITPNM1O00562 1244 aa6.42□□□□□ -1.38
RNU1-117P-201ENST00000517041 PLEKHG5O94827 1062 aa6.39□□□□□ -1.39
RNU1-117P-201ENST00000517041 PRR29P0C7W0 189 aa6.38□□□□□ -1.39
RNU1-117P-201ENST00000517041 VASPP50552 380 aaPredicted RBP6.38□□□□□ -1.39
RNU1-117P-201ENST00000517041 CHRDL2Q6WN34 429 aa6.38□□□□□ -1.39
RNU1-117P-201ENST00000517041 CLEC11AQ9Y240 323 aa6.38□□□□□ -1.39
RNU1-117P-201ENST00000517041 ZBTB47Q9UFB7 747 aaPredicted RBP6.37□□□□□ -1.39
RNU1-117P-201ENST00000517041 FXR2P51116 673 aaKnown RBP eCLIP6.34□□□□□ -1.39
RNU1-117P-201ENST00000517041 PLCD3Q8N3E9 789 aa6.31□□□□□ -1.4
RNU1-117P-201ENST00000517041 MIER1Q8N108 512 aa6.29□□□□□ -1.4
RNU1-117P-201ENST00000517041 PIP4P2Q8N4L2 257 aa6.28□□□□□ -1.4
RNU1-117P-201ENST00000517041 CREBZFQ9NS37 354 aa6.28□□□□□ -1.4
RNU1-117P-201ENST00000517041 NPM1P06748 294 aaKnown RBP eCLIP6.27□□□□□ -1.41
RNU1-117P-201ENST00000517041 PRKAR2AP13861 404 aaKnown RBP6.25□□□□□ -1.41
RNU1-117P-201ENST00000517041 MNX1P50219 401 aaPredicted RBP6.23□□□□□ -1.41
RNU1-117P-201ENST00000517041 IFNLR1Q8IU57 520 aaPredicted RBP6.23□□□□□ -1.41
RNU1-117P-201ENST00000517041 SPOCK2Q92563 424 aa6.22□□□□□ -1.41
RNU1-117P-201ENST00000517041 FARP1Q9Y4F1 1045 aaPredicted RBP6.22□□□□□ -1.41
RNU1-117P-201ENST00000517041 KLHL34Q8N239 644 aa6.21□□□□□ -1.42
RNU1-117P-201ENST00000517041 AMER1Q5JTC6 1135 aaPredicted RBP6.19□□□□□ -1.42
RNU1-117P-201ENST00000517041 CHADLQ6NUI6 762 aa6.18□□□□□ -1.42
RNU1-117P-201ENST00000517041 TRIM41Q8WV44 630 aa6.18□□□□□ -1.42
RNU1-117P-201ENST00000517041 GSE1Q14687 1217 aa6.17□□□□□ -1.42
RNU1-117P-201ENST00000517041 PAK3O75914 559 aaPredicted RBP6.16□□□□□ -1.42
RNU1-117P-201ENST00000517041 NUBP1P53384 320 aa6.16□□□□□ -1.42
RNU1-117P-201ENST00000517041 POTEHQ6S545 545 aa6.16□□□□□ -1.42
RNU1-117P-201ENST00000517041 FAM212AQ96EL1 285 aa6.16□□□□□ -1.42
RNU1-117P-201ENST00000517041 CLCN6P51797 869 aa6.14□□□□□ -1.43
RNU1-117P-201ENST00000517041 C19orf67A6NJJ6 358 aa6.12□□□□□ -1.43
RNU1-117P-201ENST00000517041 CHRM1P11229 460 aaPredicted RBP6.09□□□□□ -1.43
RNU1-117P-201ENST00000517041 CD44P16070 742 aaKnown RBP6.09□□□□□ -1.43
RNU1-117P-201ENST00000517041 RASEFQ8IZ41 740 aa6.09□□□□□ -1.43
RNU1-117P-201ENST00000517041 ZNF579Q8NAF0 562 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms