RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
RNU6-554P-201ENST00000410466 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
RNU6-554P-201ENST00000410466 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
RNU6-554P-201ENST00000410466 PHF23Q9BUL5 403 aaPredicted RBP12.11□□□□□ -0.47
RNU6-554P-201ENST00000410466 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
RNU6-554P-201ENST00000410466 FOXD1Q16676 465 aa11.57□□□□□ -0.56
RNU6-554P-201ENST00000410466 MSH5O43196 834 aa11.13□□□□□ -0.63
RNU6-554P-201ENST00000410466 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
RNU6-554P-201ENST00000410466 PPP6R1Q9UPN7 881 aa10.32□□□□□ -0.76
RNU6-554P-201ENST00000410466 ADRA2BP18089 450 aa10.28□□□□□ -0.76
RNU6-554P-201ENST00000410466 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
RNU6-554P-201ENST00000410466 CACNB1Q02641 598 aaPredicted RBP9.92□□□□□ -0.82
RNU6-554P-201ENST00000410466 DMRT2Q9Y5R5 561 aa9.71□□□□□ -0.86
RNU6-554P-201ENST00000410466 MAPK8IP2Q13387 824 aaPredicted RBP9.61□□□□□ -0.87
RNU6-554P-201ENST00000410466 SCAF1Q9H7N4 1312 aaKnown RBP9.49□□□□□ -0.89
RNU6-554P-201ENST00000410466 DCAF8L1A6NGE4 600 aa9.4□□□□□ -0.9
RNU6-554P-201ENST00000410466 RNF39Q9H2S5 420 aa9.4□□□□□ -0.9
RNU6-554P-201ENST00000410466 C1QBPQ07021 282 aaKnown RBP9.26□□□□□ -0.93
RNU6-554P-201ENST00000410466 POTEHQ6S545 545 aa9.18□□□□□ -0.94
RNU6-554P-201ENST00000410466 HOXD11P31277 338 aaPredicted RBP9.1□□□□□ -0.95
RNU6-554P-201ENST00000410466 DNAJC5BQ9UF47 199 aa8.92□□□□□ -0.98
RNU6-554P-201ENST00000410466 RNF216Q9NWF9 866 aaPredicted RBP8.88□□□□□ -0.99
RNU6-554P-201ENST00000410466 PPP4R3CPQ6ZMV5 832 aa8.83□□□□□ -1
RNU6-554P-201ENST00000410466 CNKSR2Q8WXI2 1034 aa8.82□□□□□ -1
RNU6-554P-201ENST00000410466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.73□□□□□ -1.01
RNU6-554P-201ENST00000410466 DSG3P32926 999 aa8.59□□□□□ -1.03
RNU6-554P-201ENST00000410466 CAPN15O75808 1086 aa8.55□□□□□ -1.04
RNU6-554P-201ENST00000410466 SPINK5Q9NQ38 1064 aaPredicted RBP8.48□□□□□ -1.05
RNU6-554P-201ENST00000410466 U3KPZ7 1027 aaPredicted RBP8.43□□□□□ -1.06
RNU6-554P-201ENST00000410466 NCBP3Q53F19 620 aaKnown RBP8.36□□□□□ -1.07
RNU6-554P-201ENST00000410466 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
RNU6-554P-201ENST00000410466 CHRDL2Q6WN34 429 aa8.31□□□□□ -1.08
RNU6-554P-201ENST00000410466 RBM42Q9BTD8 480 aaKnown RBP8.29□□□□□ -1.08
RNU6-554P-201ENST00000410466 ABCB7O75027 752 aa8.28□□□□□ -1.08
RNU6-554P-201ENST00000410466 TRHP20396 242 aaPredicted RBP8.26□□□□□ -1.09
RNU6-554P-201ENST00000410466 ZNF219Q9P2Y4 722 aaPredicted RBP8.24□□□□□ -1.09
RNU6-554P-201ENST00000410466 APLP2Q06481 763 aa8.22□□□□□ -1.09
RNU6-554P-201ENST00000410466 NPM3O75607 178 aaKnown RBP8.18□□□□□ -1.1
RNU6-554P-201ENST00000410466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.05□□□□□ -1.12
RNU6-554P-201ENST00000410466 HNRNPUL2Q1KMD3 747 aaKnown RBP8.05□□□□□ -1.12
RNU6-554P-201ENST00000410466 HAX1O00165 279 aa8.01□□□□□ -1.13
RNU6-554P-201ENST00000410466 SAMD1Q6SPF0 538 aaPredicted RBP7.96□□□□□ -1.14
RNU6-554P-201ENST00000410466 PIP4P2Q8N4L2 257 aa7.96□□□□□ -1.14
RNU6-554P-201ENST00000410466 SLC4A2P04920 1241 aa7.94□□□□□ -1.14
RNU6-554P-201ENST00000410466 AKT1S1Q96B36 256 aa7.93□□□□□ -1.14
RNU6-554P-201ENST00000410466 POLA2Q14181 598 aa7.87□□□□□ -1.15
RNU6-554P-201ENST00000410466 PLSCR2Q9NRY7 297 aa7.86□□□□□ -1.15
RNU6-554P-201ENST00000410466 REM2Q8IYK8 340 aaPredicted RBP7.84□□□□□ -1.15
RNU6-554P-201ENST00000410466 FXR2P51116 673 aaKnown RBP eCLIP7.8□□□□□ -1.16
RNU6-554P-201ENST00000410466 LHX8Q68G74 356 aa7.8□□□□□ -1.16
RNU6-554P-201ENST00000410466 EVX2Q03828 476 aa7.78□□□□□ -1.16
RNU6-554P-201ENST00000410466 PITPNM1O00562 1244 aa7.77□□□□□ -1.17
RNU6-554P-201ENST00000410466 ZBTB12Q9Y330 459 aaPredicted RBP7.73□□□□□ -1.17
RNU6-554P-201ENST00000410466 OSCARQ8IYS5 282 aa7.67□□□□□ -1.18
RNU6-554P-201ENST00000410466 GABBR2O75899 941 aa7.62□□□□□ -1.19
RNU6-554P-201ENST00000410466 MYCNP04198 464 aaPredicted RBP7.62□□□□□ -1.19
RNU6-554P-201ENST00000410466 C19orf67A6NJJ6 358 aa7.58□□□□□ -1.2
RNU6-554P-201ENST00000410466 PRKAR2AP13861 404 aaKnown RBP7.57□□□□□ -1.2
RNU6-554P-201ENST00000410466 KCNA4P22459 653 aa7.48□□□□□ -1.21
RNU6-554P-201ENST00000410466 CLEC11AQ9Y240 323 aa7.45□□□□□ -1.22
RNU6-554P-201ENST00000410466 SPDYE1Q8NFV5 336 aaPredicted RBP7.44□□□□□ -1.22
RNU6-554P-201ENST00000410466 POTEIP0CG38 1075 aa7.42□□□□□ -1.22
RNU6-554P-201ENST00000410466 ATF5Q9Y2D1 282 aaPredicted RBP7.42□□□□□ -1.22
RNU6-554P-201ENST00000410466 SPDYE2BA6NHP3 402 aa7.41□□□□□ -1.22
RNU6-554P-201ENST00000410466 SPDYE6P0CI01 402 aa7.41□□□□□ -1.22
RNU6-554P-201ENST00000410466 SPDYE2Q495Y8 402 aa7.41□□□□□ -1.22
RNU6-554P-201ENST00000410466 POTEMA6NI47 508 aa7.38□□□□□ -1.23
RNU6-554P-201ENST00000410466 CHADLQ6NUI6 762 aa7.34□□□□□ -1.23
RNU6-554P-201ENST00000410466 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
RNU6-554P-201ENST00000410466 DCBLD2Q96PD2 775 aa7.34□□□□□ -1.23
RNU6-554P-201ENST00000410466 CLCN6P51797 869 aa7.33□□□□□ -1.24
RNU6-554P-201ENST00000410466 CD44P16070 742 aaKnown RBP7.31□□□□□ -1.24
RNU6-554P-201ENST00000410466 PCDH10Q9P2E7 1040 aa7.31□□□□□ -1.24
RNU6-554P-201ENST00000410466 FBLN2P98095 1184 aa7.28□□□□□ -1.24
RNU6-554P-201ENST00000410466 OTUD5Q96G74 571 aa7.28□□□□□ -1.24
RNU6-554P-201ENST00000410466 PRR29P0C7W0 189 aa7.23□□□□□ -1.25
RNU6-554P-201ENST00000410466 ZNF692Q9BU19 519 aaPredicted RBP7.22□□□□□ -1.25
RNU6-554P-201ENST00000410466 FOXD4L1Q9NU39 408 aa7.21□□□□□ -1.26
RNU6-554P-201ENST00000410466 SSUH2Q9Y2M2 353 aa7.21□□□□□ -1.26
RNU6-554P-201ENST00000410466 FARP1Q9Y4F1 1045 aaPredicted RBP7.18□□□□□ -1.26
RNU6-554P-201ENST00000410466 POTEB2H3BUK9 544 aa7.15□□□□□ -1.26
RNU6-554P-201ENST00000410466 ZNF579Q8NAF0 562 aaKnown RBP7.15□□□□□ -1.26
RNU6-554P-201ENST00000410466 ZRANB1Q9UGI0 708 aa7.11□□□□□ -1.27
RNU6-554P-201ENST00000410466 GALR2O43603 387 aaPredicted RBP7.09□□□□□ -1.27
RNU6-554P-201ENST00000410466 PABPN1Q86U42 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
RNU6-554P-201ENST00000410466 MKRN4PQ13434 485 aaPredicted RBP7.05□□□□□ -1.28
RNU6-554P-201ENST00000410466 MAMSTRQ6ZN01 415 aa7.05□□□□□ -1.28
RNU6-554P-201ENST00000410466 ATXN8OSP0DMR3 200 aa7.04□□□□□ -1.28
RNU6-554P-201ENST00000410466 FAM163AQ96GL9 167 aaPredicted RBP7.04□□□□□ -1.28
RNU6-554P-201ENST00000410466 LCE2DQ5TA82 110 aaPredicted RBP7.03□□□□□ -1.28
RNU6-554P-201ENST00000410466 METRNQ9UJH8 293 aa7□□□□□ -1.29
RNU6-554P-201ENST00000410466 PAK3O75914 559 aaPredicted RBP6.98□□□□□ -1.29
RNU6-554P-201ENST00000410466 PELP1Q8IZL8 1130 aaKnown RBP6.98□□□□□ -1.29
RNU6-554P-201ENST00000410466 SLC4A1APQ9BWU0 796 aaKnown RBP6.98□□□□□ -1.29
RNU6-554P-201ENST00000410466 SCUBE2Q9NQ36 999 aa6.98□□□□□ -1.29
RNU6-554P-201ENST00000410466 SLC39A7Q92504 469 aa6.96□□□□□ -1.3
RNU6-554P-201ENST00000410466 POTEJP0CG39 1038 aa6.95□□□□□ -1.3
RNU6-554P-201ENST00000410466 C7P10643 843 aa6.95□□□□□ -1.3
RNU6-554P-201ENST00000410466 CDAN1Q8IWY9 1227 aa6.95□□□□□ -1.3
RNU6-554P-201ENST00000410466 PHF12Q96QT6 1004 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms