Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.31□□□□□ -1.56
VARS2Q5ST30 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VARS2Q5ST30 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 RNU6-414P-201ENST00000363705 104 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 RNA5SP113-201ENST00000410486 84 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 RNA5SP504-201ENST00000410676 117 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 AC019205.3-201ENST00000424573 156 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 RPL18P10-201ENST00000425606 538 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 AURKAPS2-201ENST00000454983 333 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 RNA5SP57-201ENST00000459463 123 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 RPS29P2-201ENST00000479278 136 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 RN7SL441P-201ENST00000492388 296 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 SNORD77.4-201ENST00000516158 81 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 IGKV2D-19-201ENST00000523346 262 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 MIR5096-201ENST00000583713 70 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 AC116447.1-201ENST00000613153 453 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 5S_rRNA.13-201ENST00000622298 123 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 MIR3529-201ENST00000637713 78 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARS2Q5ST30 AL450345.1-202ENST00000605741 3881 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VARS2Q5ST30 AC125257.1-201ENST00000560400 2930 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 AC106871.1-201ENST00000568324 3102 ntBASIC5.3□□□□□ -1.56
VARS2Q5ST30 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
VARS2Q5ST30 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VARS2Q5ST30 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.29□□□□□ -1.56
VARS2Q5ST30 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.29□□□□□ -1.56
VARS2Q5ST30 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VARS2Q5ST30 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VARS2Q5ST30 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
VARS2Q5ST30 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VARS2Q5ST30 DEFB108F-201ENST00000344638 222 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 RNA5SP191-201ENST00000362585 102 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 AL451046.2-201ENST00000403074 277 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 RNU6-603P-201ENST00000411403 107 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
VARS2Q5ST30 KC877373.1-201ENST00000479066 408 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 RPL23AP54-201ENST00000495129 419 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 AC091042.1-201ENST00000579213 173 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VARS2Q5ST30 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.29□□□□□ -1.56
VARS2Q5ST30 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VARS2Q5ST30 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.29□□□□□ -1.56
VARS2Q5ST30 SMG1P7-201ENST00000565246 2704 ntBASIC5.29□□□□□ -1.56
VARS2Q5ST30 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VARS2Q5ST30 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VARS2Q5ST30 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VARS2Q5ST30 MARK2P15-201ENST00000432204 2186 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
VARS2Q5ST30 RNY3P2-201ENST00000362918 102 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 Y_RNA.213-201ENST00000364178 111 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 Y_RNA.265-201ENST00000364677 108 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 RNU6-837P-201ENST00000391056 108 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 U3.26-201ENST00000391236 204 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VARS2Q5ST30 MIR208B-201ENST00000401172 77 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 ATP6V0E1P1-201ENST00000412537 226 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 SNRPEP9-201ENST00000436794 238 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 Z75741.1-201ENST00000446793 314 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.28□□□□□ -1.56
VARS2Q5ST30 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.28□□□□□ -1.56
VARS2Q5ST30 snoU13.1-201ENST00000459157 104 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 RNU6-830P-201ENST00000516353 107 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 RNU7-116P-201ENST00000516940 62 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 SNORA31.23-201ENST00000517219 133 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 CKS1BP7-201ENST00000522230 235 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 DEFB131E-201ENST00000532329 154 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.28□□□□□ -1.56
VARS2Q5ST30 AC025281.1-201ENST00000567026 265 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 AC053481.4-201ENST00000583164 216 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.28□□□□□ -1.56
VARS2Q5ST30 AL391358.1-201ENST00000605342 190 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
VARS2Q5ST30 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VARS2Q5ST30 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VARS2Q5ST30 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VARS2Q5ST30 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VARS2Q5ST30 ADAM3A-203ENST00000461344 2157 ntBASIC5.28□□□□□ -1.56
VARS2Q5ST30 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.28□□□□□ -1.56
VARS2Q5ST30 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VARS2Q5ST30 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
VARS2Q5ST30 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VARS2Q5ST30 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms