RNA–Protein interactions for RNA: ENST00000344638.4

DEFB108F-201, Transcript of defensin beta 108F (pseudogene), humanhuman

BASIC

Gene DEFB108F, Length 222 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB108F-201ENST00000344638 CHIC1Q5VXU3 224 aa11.84□□□□□ -0.51
DEFB108F-201ENST00000344638 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
DEFB108F-201ENST00000344638 PHF23Q9BUL5 403 aaPredicted RBP10.55□□□□□ -0.72
DEFB108F-201ENST00000344638 PLPPR3Q6T4P5 718 aa9.81□□□□□ -0.84
DEFB108F-201ENST00000344638 SENP3Q9H4L4 574 aaPredicted RBP9.69□□□□□ -0.86
DEFB108F-201ENST00000344638 ADRA2BP18089 450 aa9.29□□□□□ -0.92
DEFB108F-201ENST00000344638 EHMT2Q96KQ7 1210 aa9.21□□□□□ -0.94
DEFB108F-201ENST00000344638 KCNA4P22459 653 aa9.2□□□□□ -0.94
DEFB108F-201ENST00000344638 PPP6R1Q9UPN7 881 aa9.15□□□□□ -0.94
DEFB108F-201ENST00000344638 FOXD1Q16676 465 aa9□□□□□ -0.97
DEFB108F-201ENST00000344638 CSRNP3Q8WYN3 585 aa8.89□□□□□ -0.99
DEFB108F-201ENST00000344638 SLC4A1APQ9BWU0 796 aaKnown RBP8.81□□□□□ -1
DEFB108F-201ENST00000344638 PPP4R3CPQ6ZMV5 832 aa8.76□□□□□ -1.01
DEFB108F-201ENST00000344638 NCBP3Q53F19 620 aaKnown RBP8.61□□□□□ -1.03
DEFB108F-201ENST00000344638 PIAS4Q8N2W9 510 aaPredicted RBP8.58□□□□□ -1.04
DEFB108F-201ENST00000344638 NPM3O75607 178 aaKnown RBP8.57□□□□□ -1.04
DEFB108F-201ENST00000344638 ZBTB22O15209 634 aa8.51□□□□□ -1.05
DEFB108F-201ENST00000344638 CNKSR2Q8WXI2 1034 aa8.36□□□□□ -1.07
DEFB108F-201ENST00000344638 SLC24A1O60721 1099 aa8.26□□□□□ -1.09
DEFB108F-201ENST00000344638 FOXD4L1Q9NU39 408 aa8.25□□□□□ -1.09
DEFB108F-201ENST00000344638 RTN4Q9NQC3 1192 aaKnown RBP8.24□□□□□ -1.09
DEFB108F-201ENST00000344638 SCAF1Q9H7N4 1312 aaKnown RBP8.23□□□□□ -1.09
DEFB108F-201ENST00000344638 DNAJC5BQ9UF47 199 aa8.19□□□□□ -1.1
DEFB108F-201ENST00000344638 MAPK8IP2Q13387 824 aaPredicted RBP8.16□□□□□ -1.1
DEFB108F-201ENST00000344638 AMER1Q5JTC6 1135 aaPredicted RBP8.15□□□□□ -1.1
DEFB108F-201ENST00000344638 RNF216Q9NWF9 866 aaPredicted RBP8.06□□□□□ -1.12
DEFB108F-201ENST00000344638 MSH5O43196 834 aa7.99□□□□□ -1.13
DEFB108F-201ENST00000344638 SLC4A2P04920 1241 aa7.99□□□□□ -1.13
DEFB108F-201ENST00000344638 FKBP8Q14318 412 aa7.96□□□□□ -1.14
DEFB108F-201ENST00000344638 HOXD11P31277 338 aaPredicted RBP7.91□□□□□ -1.14
DEFB108F-201ENST00000344638 ATXN8OSP0DMR3 200 aa7.89□□□□□ -1.15
DEFB108F-201ENST00000344638 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
DEFB108F-201ENST00000344638 DMRT2Q9Y5R5 561 aa7.85□□□□□ -1.15
DEFB108F-201ENST00000344638 ATF5Q9Y2D1 282 aaPredicted RBP7.71□□□□□ -1.18
DEFB108F-201ENST00000344638 PLCB2Q00722 1185 aa7.53□□□□□ -1.2
DEFB108F-201ENST00000344638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.51□□□□□ -1.21
DEFB108F-201ENST00000344638 SAMD1Q6SPF0 538 aaPredicted RBP7.49□□□□□ -1.21
DEFB108F-201ENST00000344638 U3KPZ7 1027 aaPredicted RBP7.49□□□□□ -1.21
DEFB108F-201ENST00000344638 DCAF8L1A6NGE4 600 aa7.47□□□□□ -1.21
DEFB108F-201ENST00000344638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.47□□□□□ -1.21
DEFB108F-201ENST00000344638 HNRNPUL2Q1KMD3 747 aaKnown RBP7.47□□□□□ -1.21
DEFB108F-201ENST00000344638 FBXO3Q9UK99 471 aa7.45□□□□□ -1.22
DEFB108F-201ENST00000344638 ZNF219Q9P2Y4 722 aaPredicted RBP7.44□□□□□ -1.22
DEFB108F-201ENST00000344638 HAP1P54257 671 aaPredicted RBP7.42□□□□□ -1.22
DEFB108F-201ENST00000344638 SPDYE4A6NLX3 237 aa7.41□□□□□ -1.22
DEFB108F-201ENST00000344638 PRKCSHP14314 528 aaPredicted RBP7.41□□□□□ -1.22
DEFB108F-201ENST00000344638 PROM2Q8N271 834 aa7.39□□□□□ -1.23
DEFB108F-201ENST00000344638 VASPP50552 380 aaPredicted RBP7.38□□□□□ -1.23
DEFB108F-201ENST00000344638 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
DEFB108F-201ENST00000344638 IFNLR1Q8IU57 520 aaPredicted RBP7.38□□□□□ -1.23
DEFB108F-201ENST00000344638 BCANQ96GW7 911 aa7.35□□□□□ -1.23
DEFB108F-201ENST00000344638 DCAF8L2P0C7V8 631 aa7.34□□□□□ -1.23
DEFB108F-201ENST00000344638 PKD2Q13563 968 aa7.34□□□□□ -1.23
DEFB108F-201ENST00000344638 VSIG10Q8N0Z9 540 aa7.32□□□□□ -1.24
DEFB108F-201ENST00000344638 TAOK2Q9UL54 1235 aa7.32□□□□□ -1.24
DEFB108F-201ENST00000344638 KDM2AQ9Y2K7 1162 aa7.27□□□□□ -1.25
DEFB108F-201ENST00000344638 NPM1P06748 294 aaKnown RBP eCLIP7.23□□□□□ -1.25
DEFB108F-201ENST00000344638 FBLN2P98095 1184 aa7.23□□□□□ -1.25
DEFB108F-201ENST00000344638 APLP2Q06481 763 aa7.23□□□□□ -1.25
DEFB108F-201ENST00000344638 TPRNQ4KMQ1 711 aa7.21□□□□□ -1.26
DEFB108F-201ENST00000344638 BBXQ8WY36 941 aaPredicted RBP7.2□□□□□ -1.26
DEFB108F-201ENST00000344638 PAXIP1Q6ZW49 1069 aaPredicted RBP7.18□□□□□ -1.26
DEFB108F-201ENST00000344638 POLA2Q14181 598 aa7.17□□□□□ -1.26
DEFB108F-201ENST00000344638 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.17□□□□□ -1.26
DEFB108F-201ENST00000344638 ECM2O94769 699 aaPredicted RBP7.15□□□□□ -1.26
DEFB108F-201ENST00000344638 TRHP20396 242 aaPredicted RBP7.15□□□□□ -1.26
DEFB108F-201ENST00000344638 CFAP44Q96MT7 982 aa7.15□□□□□ -1.26
DEFB108F-201ENST00000344638 SPINK5Q9NQ38 1064 aaPredicted RBP7.15□□□□□ -1.26
DEFB108F-201ENST00000344638 SPOCK2Q92563 424 aa7.14□□□□□ -1.27
DEFB108F-201ENST00000344638 KLHL34Q8N239 644 aa7.12□□□□□ -1.27
DEFB108F-201ENST00000344638 TSHZ2Q9NRE2 1034 aa7.11□□□□□ -1.27
DEFB108F-201ENST00000344638 RGL2O15211 777 aa7.1□□□□□ -1.27
DEFB108F-201ENST00000344638 SPRYD3Q8NCJ5 442 aa7.07□□□□□ -1.28
DEFB108F-201ENST00000344638 CAPN15O75808 1086 aa7.03□□□□□ -1.28
DEFB108F-201ENST00000344638 STAG3Q9UJ98 1225 aa7.02□□□□□ -1.29
DEFB108F-201ENST00000344638 PLCD3Q8N3E9 789 aa7□□□□□ -1.29
DEFB108F-201ENST00000344638 ABCB7O75027 752 aa6.99□□□□□ -1.29
DEFB108F-201ENST00000344638 CHGAP10645 457 aaKnown RBP6.99□□□□□ -1.29
DEFB108F-201ENST00000344638 DNAJC5Q9H3Z4 198 aa6.99□□□□□ -1.29
DEFB108F-201ENST00000344638 MIER1Q8N108 512 aa6.98□□□□□ -1.29
DEFB108F-201ENST00000344638 ZBTB12Q9Y330 459 aaPredicted RBP6.98□□□□□ -1.29
DEFB108F-201ENST00000344638 ZNF692Q9BU19 519 aaPredicted RBP6.97□□□□□ -1.29
DEFB108F-201ENST00000344638 RNF39Q9H2S5 420 aa6.96□□□□□ -1.3
DEFB108F-201ENST00000344638 CIZ1Q9ULV3 898 aaPredicted RBP6.95□□□□□ -1.3
DEFB108F-201ENST00000344638 TIMELESSQ9UNS1 1208 aa6.93□□□□□ -1.3
DEFB108F-201ENST00000344638 SSUH2Q9Y2M2 353 aa6.93□□□□□ -1.3
DEFB108F-201ENST00000344638 NBR1Q14596 966 aa6.92□□□□□ -1.3
DEFB108F-201ENST00000344638 PABPN1Q86U42 306 aaKnown RBP eCLIP6.91□□□□□ -1.3
DEFB108F-201ENST00000344638 HS6ST3Q8IZP7 471 aa6.9□□□□□ -1.3
DEFB108F-201ENST00000344638 SPDYE2BA6NHP3 402 aa6.89□□□□□ -1.31
DEFB108F-201ENST00000344638 TULP1O00294 542 aaPredicted RBP6.89□□□□□ -1.31
DEFB108F-201ENST00000344638 SPDYE6P0CI01 402 aa6.89□□□□□ -1.31
DEFB108F-201ENST00000344638 SPDYE2Q495Y8 402 aa6.89□□□□□ -1.31
DEFB108F-201ENST00000344638 OSCARQ8IYS5 282 aa6.89□□□□□ -1.31
DEFB108F-201ENST00000344638 C1QBPQ07021 282 aaKnown RBP6.87□□□□□ -1.31
DEFB108F-201ENST00000344638 RNF25Q96BH1 459 aaPredicted RBP6.87□□□□□ -1.31
DEFB108F-201ENST00000344638 NKX1-1Q15270 411 aaPredicted RBP6.86□□□□□ -1.31
DEFB108F-201ENST00000344638 GTF3C3Q9Y5Q9 886 aa6.86□□□□□ -1.31
DEFB108F-201ENST00000344638 POTEDQ86YR6 584 aa6.85□□□□□ -1.31
DEFB108F-201ENST00000344638 TRIM41Q8WV44 630 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms