Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL356575.1-201ENST00000603008 283 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 AP005019.3-201ENST00000620418 560 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LRCH3Q96II8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.18□□□□□ -1.58
LRCH3Q96II8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.18□□□□□ -1.58
LRCH3Q96II8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRCH3Q96II8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LRCH3Q96II8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 MARK2P15-201ENST00000432204 2186 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 RNU6-766P-201ENST00000362478 107 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 RNU6-647P-201ENST00000364243 107 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 Y_RNA.346-201ENST00000365385 112 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 RNU6-144P-201ENST00000383951 107 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 MIR153-1-201ENST00000384914 90 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 MIR589-201ENST00000385238 99 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 COX5BP7-201ENST00000414780 274 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 AC040958.1-201ENST00000561102 201 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 RPL30P11-203ENST00000598995 310 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 AC025946.2-201ENST00000603398 234 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 AC019206.1-201ENST00000621938 425 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LRCH3Q96II8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 SALL4P2-201ENST00000423288 2910 ntBASIC5.17□□□□□ -1.58
LRCH3Q96II8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.17□□□□□ -1.58
LRCH3Q96II8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRCH3Q96II8 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRCH3Q96II8 RNU6-573P-201ENST00000383938 106 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 MIR491-201ENST00000384877 84 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 Y_RNA.685-201ENST00000516532 108 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 AC025166.1-201ENST00000612411 163 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRCH3Q96II8 STX3-208ENST00000641815 3236 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.16□□□□□ -1.58
LRCH3Q96II8 AC106871.1-201ENST00000568324 3102 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 AC004817.4-201ENST00000602396 3625 ntBASIC5.16□□□□□ -1.58
LRCH3Q96II8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRCH3Q96II8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LRCH3Q96II8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LRCH3Q96II8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.58
LRCH3Q96II8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LRCH3Q96II8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.15□□□□□ -1.58
LRCH3Q96II8 MIR634-201ENST00000385208 97 ntBASIC5.15□□□□□ -1.59
LRCH3Q96II8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 RPL23AP93-201ENST00000440847 484 ntBASIC5.15□□□□□ -1.59
LRCH3Q96II8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 RNU6-412P-201ENST00000516434 106 ntBASIC5.15□□□□□ -1.59
LRCH3Q96II8 CR383656.8-201ENST00000549046 145 ntBASIC5.15□□□□□ -1.59
LRCH3Q96II8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 AC007179.3-201ENST00000604976 235 ntBASIC5.15□□□□□ -1.59
LRCH3Q96II8 MIR3653-201ENST00000625572 110 ntBASIC5.15□□□□□ -1.59
LRCH3Q96II8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRCH3Q96II8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
LRCH3Q96II8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LRCH3Q96II8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LRCH3Q96II8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LRCH3Q96II8 Y_RNA.243-201ENST00000364481 109 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 Y_RNA.328-201ENST00000365208 113 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 RNU6-756P-201ENST00000383997 107 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 U1.1-201ENST00000384101 164 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 SNORA48.5-201ENST00000391143 135 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 SNORA79-201ENST00000408376 140 ntBASIC5.14□□□□□ -1.59
LRCH3Q96II8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.14□□□□□ -1.59
LRCH3Q96II8 AL117339.2-201ENST00000430475 180 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms