Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 RPS2P4-201ENST00000476944 856 ntBASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.54■■□□□ 1.2
CYP46A1Q9Y6A2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 KSR1P1-201ENST00000446298 240 ntBASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.53■■□□□ 1.2
CYP46A1Q9Y6A2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 FAM201B-201ENST00000458407 597 ntBASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.52■■□□□ 1.2
CYP46A1Q9Y6A2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CYP46A1Q9Y6A2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CYP46A1Q9Y6A2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 KRT8P11-201ENST00000409686 1436 ntBASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 AL353807.1-201ENST00000427475 662 ntBASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.51■■□□□ 1.19
CYP46A1Q9Y6A2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
CYP46A1Q9Y6A2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.49■■□□□ 1.19
CYP46A1Q9Y6A2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms