Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 ANO7L1-203ENST00000602586 1720 ntBASIC21.69■■□□□ 1.06
CLIC4Q9Y696 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 NIFKP9-201ENST00000419265 221 ntBASIC21.69■■□□□ 1.06
CLIC4Q9Y696 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 HTR7P1-201ENST00000538670 1336 ntBASIC21.69■■□□□ 1.06
CLIC4Q9Y696 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 KRT8P11-201ENST00000409686 1436 ntBASIC21.69■■□□□ 1.06
CLIC4Q9Y696 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLIC4Q9Y696 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 AC007613.1-201ENST00000572811 2597 ntBASIC21.68■■□□□ 1.06
CLIC4Q9Y696 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLIC4Q9Y696 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.67■■□□□ 1.06
CLIC4Q9Y696 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC4Q9Y696 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 RPPH1-201ENST00000516869 333 ntBASIC21.66■■□□□ 1.06
CLIC4Q9Y696 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC4Q9Y696 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms