Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 AC005521.1-201ENST00000393351 872 ntBASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 FITM1-202ENST00000559294 800 ntBASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 AP005242.2-201ENST00000580065 1175 ntBASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 AC005363.2-201ENST00000618631 242 ntBASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 AL161938.1-201ENST00000569833 2180 ntBASIC19.22■□□□□ 0.67
RAI2Q9Y5P3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI2Q9Y5P3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.2■□□□□ 0.66
RAI2Q9Y5P3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI2Q9Y5P3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms